Gene Dshi_3865 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_3865 
Symbol 
ID5714394 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009956 
Strand
Start bp74804 
End bp75793 
Gene Length990 bp 
Protein Length329 aa 
Translation table11 
GC content67% 
IMG OID641276778 
Producthypothetical protein 
Protein accessionYP_001542074 
Protein GI159046403 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.288718 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones50 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGAACGGC TTTACATCCA CATCGGCGCC CCCAAGACTG GCACGACCTA TATCCAGCAC 
GTGCTGAGCA AGTCCGCGCA CGCGCTGGCC GCCCATGATT TTGTCTACCT GGAGGCATCG
CGGCTCTATG CGGGGCATCA CTGCTTGGCC TTCGCCATGC AGGGCGAGGA CAACCCGCAA
ACCCATGAGC CGATCGACCT GGCGGCGGAG CTGGACAGCC TGACCACCGA GATCGACGGC
ACCCGGGCCC GGTTCGGGAT CCTGTCCAGC GAGGAATTCT TCATCTGTCC CGAGGGTGCG
ATCGCGGCCC TCAGGACCGC GCTCGGCGAC CTGCCCGTGA CGATCATCGC CTTCGTGCGC
AGATCCGACG ACTTTCTGCT GTCCTACCAC AATGAACGGA TGAAGAAGTT CACGAAGGTC
TTCACCCATT CGATCAAGGA CATGATCGCG GACAGGACCC TCTGGCCGCG GGAGATGGCG
TTCCGGACCA ACCTGCTGAC CTGGGCCCGG GTGTTCCCGG AGACGCCGCC GCGCGTGCAT
GCCTACGAGG CGGGCAACCC GCTCGTGACC CTGCTGGGCG ATCTCGGCAT TCACAGCGGA
ATCGGGATCC CCCCGAAAAT GCGTCCGAAC CGCAGCAAGC CGGCGAAGGC GATCGCGCTG
CTGCGGTTGC TCAAGCTGGC CGACTGGCCC GCCGACGACC GCGGGCGGGT CTGCACGGCC
CTGTTCGACG CTTTCGCGGA GGACACGACG CCGATGATCG GCCCCCGGGA CCGGGCGCGG
ATCCTGCAGG GGAACGACCG CGAACTTTCC GGCCTGTTCG AGAGCCTTGG CCTCGAAGAC
CCTTATGCGG ACATCGCCCG CCGGCTCCCC GCCACCGAGG TCCGCCCCGT GACCGAGATC
CCGGTGGCGG CGCTGATCGA CGAGGCGGAG GCCGGAACCG GCTGTGACTT CTCGAACCTG
CGGGCCTTTG CGGCGCAGGC AGCGGAATAG
 
Protein sequence
MERLYIHIGA PKTGTTYIQH VLSKSAHALA AHDFVYLEAS RLYAGHHCLA FAMQGEDNPQ 
THEPIDLAAE LDSLTTEIDG TRARFGILSS EEFFICPEGA IAALRTALGD LPVTIIAFVR
RSDDFLLSYH NERMKKFTKV FTHSIKDMIA DRTLWPREMA FRTNLLTWAR VFPETPPRVH
AYEAGNPLVT LLGDLGIHSG IGIPPKMRPN RSKPAKAIAL LRLLKLADWP ADDRGRVCTA
LFDAFAEDTT PMIGPRDRAR ILQGNDRELS GLFESLGLED PYADIARRLP ATEVRPVTEI
PVAALIDEAE AGTGCDFSNL RAFAAQAAE