| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_3862 |
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| Symbol | |
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| ID | 5714391 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009956 |
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| Strand | + |
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| Start bp | 70763 |
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| End bp | 72700 |
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| Gene Length | 1938 bp |
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| Protein Length | 645 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641276775 |
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| Product | hypothetical protein |
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| Protein accession | YP_001542071 |
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| Protein GI | 159046400 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.242184 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 46 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACATCCT ATATCATGAC CGCCGCGCAA CAGGCGCCGG ATGGTGATGC CAAGGACCTG
AAACAGGCTC TTCAAAAGGC TTTTGAGAGG CATGCGGGCC GTCTTCCCGC TGATGGATCA
GAGGTGATGT CCTCGATCAA CGCCTCGGTG GCGGTCCGGC TCTTTGCCTT GATGTACATG
CGCGGTGTGC AGCATCGCCT GATGCCGGAT AACGAGAGTG CGGTCCTGTG CGAGGCTTTG
TGCAAGACGG TCTGCGAGGT CGAGATCACC GATAAGTTCG ACGACATGTT CGTGTCGAAC
TTCGTGCTGG GGCTGATCGT GTTTCTCGAT CTTGTGCAGG ATGATTTGCA CCCTGACACG
CGGGCCGGCC TGGTTGCTAA GATCGCCGAA TGCCGGGACT GGTTGTCCGA GGCGCGTCAT
CGCAAGGTAT TCGGCACGCG CGAGACCGAG GGCACCTATG CCTGGAATCA CTCCGCCTGC
GCGGCGGCGG GCCTGGCGCT GAGCGTGATC TGGACCCGGG ATAGCCAGGC GGACTGGACC
GACACAGACT TTCACGATGT GGATTTCGGG CTGCGCCGGA TCGAAGACTA TTTCCTGCAC
GGCATCCGCG AAACAGGGGT CCCCTATGAG GGGTTCTATT ACTGTGGCGC GGTGTTTCGG
GTGCTTGGCC CCTTCGACAT TCTGGTGCGC AAGGACGCCG AGGTAGAACG CCGCTATCGG
CGCATCCGGG ATCGTCACAA GCGTAAGCTT GGCCAGTTGC TGGACTGGTA CGAGAGTGGC
ACCATCGTCA ACCAACGCGC GCTGCTCAGC TACAATCATT CGCTTTATGA CGCTCACCCG
GCGGTGAACG GTTTTCTGAC CTTCTTTCGG TCCGAGTTCG AGGTAAAGGC GGGCCGCATG
TGGTCTCGGC TGATGGCGAA AGGCACGTCC CTGCAATTCG TCGAGCGCAG CCGGGACTGG
GGCGACAACA CTCTGCACGA GGCTTTGTTG TTCCTGCATC CCAAAGGCTA TTCAGCACCG
CGTAACAAGG TGCAGACCCT TCTGTCGCGG ACCGAAGGCT ATGGGCTGCT GGTGTCGGAG
GACGCCTCCA GCCGACTGTT CGTGAAGGCC AGCAAACTGC TGATCGGGCC GCATAACCAG
TCTGATGCGG GCCATGTCAG TTGGGTCTGT AATGGTGATG CGGTGTTGAT CGACGCCGGG
CCGGGCCGCA AGGTGCGCGA TGCGTCGAAG AAGTGGGCGG AGTATTCCAA GGGCACCTAC
CGGACCGAAG GCAGCGGCGC TTCGTCCTAT GGCCATAACG CCGTGCTGAT CGACGGGCGG
GGGCAGTTGC CCTCTGGCGA GGGGGACGGC ATCGAGGGGC GCCTAAGCTA TGTCCGTCAA
ACCGAAGATT TCTGGTTGCT CGGGACCGAT GCCAGGGCGG CCTACAATAA GGATGAGTAT
AACCCCGTCC AGGTGGCCGA TAGGCATGTG GCGTTTTCCA AGGCGGCGGG CGCCTATCTG
ATCCTGATCG ACCGGGTGGT ACCGCAGGCG CCGGGGACCC ATCGGTTCCA GCGGCTTCTG
CAGTTTGCAG ACCCCGCGCA GGTGGTTGAG GAGGATGGTC CCGGCCGAAT GGCGGTGACC
AGCGGGGGCA CGGTCTATGA CCTGTGGACC CTGAGCCCGA CCGGGCCCCT GAGCACGGTC
TACGAGGAAG AGAAATTCCA GATGCCGATC AAGACCCGGG GCGTGCTGGC CCATGGGGTC
GAGGCCGAGG ACCTGTGGAT GTATACGGTC CTCGCCGCCC GCGGGAGTGC CGGGGTGCCG
ACGGATGTGT CCCTGCGCCC GGCCGAGGAC GCGGCCTTCG GGGCCGCGCT GCAGCTGGTG
CTGGAGGGGG GCGACACCCG GCTCCTGGCC CTGTCGCGGA CGACGGGGGA GCTTGAGCGG
ATTTCCGACG ACGGCTGA
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| Protein sequence | MTSYIMTAAQ QAPDGDAKDL KQALQKAFER HAGRLPADGS EVMSSINASV AVRLFALMYM
RGVQHRLMPD NESAVLCEAL CKTVCEVEIT DKFDDMFVSN FVLGLIVFLD LVQDDLHPDT
RAGLVAKIAE CRDWLSEARH RKVFGTRETE GTYAWNHSAC AAAGLALSVI WTRDSQADWT
DTDFHDVDFG LRRIEDYFLH GIRETGVPYE GFYYCGAVFR VLGPFDILVR KDAEVERRYR
RIRDRHKRKL GQLLDWYESG TIVNQRALLS YNHSLYDAHP AVNGFLTFFR SEFEVKAGRM
WSRLMAKGTS LQFVERSRDW GDNTLHEALL FLHPKGYSAP RNKVQTLLSR TEGYGLLVSE
DASSRLFVKA SKLLIGPHNQ SDAGHVSWVC NGDAVLIDAG PGRKVRDASK KWAEYSKGTY
RTEGSGASSY GHNAVLIDGR GQLPSGEGDG IEGRLSYVRQ TEDFWLLGTD ARAAYNKDEY
NPVQVADRHV AFSKAAGAYL ILIDRVVPQA PGTHRFQRLL QFADPAQVVE EDGPGRMAVT
SGGTVYDLWT LSPTGPLSTV YEEEKFQMPI KTRGVLAHGV EAEDLWMYTV LAARGSAGVP
TDVSLRPAED AAFGAALQLV LEGGDTRLLA LSRTTGELER ISDDG
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