| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_3854 |
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| Symbol | |
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| ID | 5714383 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009956 |
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| Strand | - |
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| Start bp | 59311 |
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| End bp | 60357 |
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| Gene Length | 1047 bp |
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| Protein Length | 348 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641276767 |
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| Product | hypothetical protein |
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| Protein accession | YP_001542063 |
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| Protein GI | 159046392 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG5534] Plasmid replication initiator protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.677421 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 52 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACATCGG ATCTGAGTAT CTCCAACGCC GGGCGCGGGC TTGCGCCGGA TCGGTATCGT
CAGGCGGATT TCTTCGTCTG CGATATCTTC GACGCGATCC CCAAGGATGA TCTCGCGACC
ATGGAGCACC CGGTGTTCAG CCTCGCTACC CGGCCGGACA GGCGGGTGCT GTCCTATGCC
CATAACGGGG TGGAGATCGA GGTGACCCCG AGCGTCAAGG GGCTGGCCAC GATCCACGAC
AAGGACATCC TGATCTTCTG CATCAGCCAG CTGATGGCGG CGCTGAACGC GGGGCGCGCG
GTGAGCCGGA CGCTCCAGAT CAAGGCCCAT GATTTGCTGG TGGCGACGAA CCGCGAGACA
TCCGGAGACG CGTATCGGCG GCTGCGCGAG GCGTTCGAGC GGCTGGCAGG CACGCGGATC
ACCACCAACC TGACCACCGG AGGGCAGGAG GTGACGCGCG GCTTCGGGCT GATCGAGAGC
TGGGAGATCG TGCGCAAGGC GCGCGGCGGG CGGATGGTGA GCGTGAGCGT GACGCTGTCG
GAATGGCTCT TCAATGCGGT GGTCAGCAAA TCGGTGCTGA CGCTGAGCCG GGATTACTTC
CGGCTGCGCA AGCCCCTGGA GCGGCGGATC TACGAGTTGG CGCGCAAGCA TTGTGGCCGG
CAGGCGCGCT GGGTGGTGTC GGTGGACCTG CTCTTGAAGA AGTCGGGCTC GGCCTCCCCG
CGCCGGGTGT TTCGCAAGAT GCTGCGCGAC ATGATCGCCG CCGATCATCT GCCCGATTAC
GAGATGGTCG AGGTGCCGGG CGACAAGATC GCGTTTGCCT TGCGCGGCGG GCTGGTGGAG
GACGCGGGCC CCGGGTTGGG TGCGGCCCTG CCGCCCCTGC GGGCCGAGAC CCTGGAGGAG
GCCCGGGCGC TGGCACCCGG CTGGGATGTC TACGGGCTGG AGGCGGACTG GCGCGCGTAC
TGGGCCGGAT CGGGCCGTCC GCGCCTGCGC AGCGCCGACA AGGCGTTCCT GGGCTTCGTG
CGGGCGCGCA TAGGGGCGGA AGGGTAG
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| Protein sequence | MTSDLSISNA GRGLAPDRYR QADFFVCDIF DAIPKDDLAT MEHPVFSLAT RPDRRVLSYA
HNGVEIEVTP SVKGLATIHD KDILIFCISQ LMAALNAGRA VSRTLQIKAH DLLVATNRET
SGDAYRRLRE AFERLAGTRI TTNLTTGGQE VTRGFGLIES WEIVRKARGG RMVSVSVTLS
EWLFNAVVSK SVLTLSRDYF RLRKPLERRI YELARKHCGR QARWVVSVDL LLKKSGSASP
RRVFRKMLRD MIAADHLPDY EMVEVPGDKI AFALRGGLVE DAGPGLGAAL PPLRAETLEE
ARALAPGWDV YGLEADWRAY WAGSGRPRLR SADKAFLGFV RARIGAEG
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