| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_3839 |
|---|
| Symbol | |
|---|
| ID | 5714368 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dinoroseobacter shibae DFL 12 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009956 |
|---|
| Strand | - |
|---|
| Start bp | 48216 |
|---|
| End bp | 48713 |
|---|
| Gene Length | 498 bp |
|---|
| Protein Length | 165 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 641276754 |
|---|
| Product | Ferritin Dps family protein |
|---|
| Protein accession | YP_001542050 |
|---|
| Protein GI | 159046379 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0783] DNA-binding ferritin-like protein (oxidative damage protectant) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 47 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGACG CATTGAAAAT CATCCCCTCC ACCGACGACG TGTCCACCGG CGTCCGCGAC
ACCGCCACCA TCGCCAGCGG TCTGGCGGAT GTGCTGTCGG ACACCTACCG GCTGGTGTTC
AAGACCCATG CCTATCACTG GAACGTGGAG GGACCGCTGT TCTATTCGGT GCACAAGATG
ACCGAGGAGC AGTACGAGAA CATGTTCGCG GCCGCCGACG AGCTGGCCGA GCGGATCCGC
GCCCTGGGCG AGCTGGCCCC GATGCAGCTG AGCGCCGTGA TGGAGCGGTC GCGGGTGCAG
GACGGCCATG ATGGCATGAG TGCCTTCGAA ATGATCGAGG ATCTGGCCGC CGACCATGAG
AAGATCGCGC ACCGGCTCCA CGCGCTGGTG GAGCTTGTGG AGAGCCGCAA GGACCCGGTG
ACCGAGGATC TGGCGACCGA GCGCAGCGCG TTCCACGAGC AAGCGGCCTG GATGCTGCGC
GCGCTGACAA AGTCCTGA
|
|---|
| Protein sequence | MTDALKIIPS TDDVSTGVRD TATIASGLAD VLSDTYRLVF KTHAYHWNVE GPLFYSVHKM
TEEQYENMFA AADELAERIR ALGELAPMQL SAVMERSRVQ DGHDGMSAFE MIEDLAADHE
KIAHRLHALV ELVESRKDPV TEDLATERSA FHEQAAWMLR ALTKS
|
|---|
| |