| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_3834 |
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| Symbol | |
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| ID | 5714363 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009956 |
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| Strand | - |
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| Start bp | 43171 |
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| End bp | 44907 |
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| Gene Length | 1737 bp |
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| Protein Length | 578 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641276749 |
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| Product | signal transduction histidine kinase |
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| Protein accession | YP_001542045 |
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| Protein GI | 159046374 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3920] Signal transduction histidine kinase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.391649 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGCCGGAAA CCAGAGCGCG GCCTGAGCCT GTGCGCCTGT CCTTGCGCAG CCTGCCGGTT
CGGCTGATCG GCCTGATGAC GCTTGCCCTG CTGCCGCTCG GGTTGATCTC GCTCTACCAG
ACGCGGAGCG TGATCGACCG GGCGGAGGAT CTGGCCCGCG GCGCCCTGAT CGCCGAAGCG
CGGCAGGCCG TGGCCCTGGA GCGTCGGGTC CTGATCGAGG CGGTGGGCGC GGCCCGGGGG
CTGGGGGTTG CCCTGTTGCC GCTTCTGGAC GATCCCGCCC GGTGCAGCGC GGTGCTGGGC
GAATTCATCG ACCAAAGCAA CCAGATCGTG TTCGCCGGAT TCCTGCCGCC GGACGGGGTG
ATGCGGTGTT CGAGCCATGG CGAGGAGGTG GATTTCTCGG ATTTTCCGGG ATTTGCAGAG
TTGATGGCCG CGCCGGGCCT GAGTTTCGAG GTGAACGAAC AGGGCGCGGT GAGCGGCCAG
TCAGTGATGA TCGCCAATGT GCCGATCTAT GCGGCGGGGG CATTTGCGGG TTATGTCGCG
ATCTCGATCC CCCATGCCAT CGTCAACGAC CTGTTGCCGA GCCAACCCGC CGAGCGCGGG
CTGGAGATCG TGGTGCTGAA CCGCGCGGGC GAGGTGATCT CCGCCTCCGA AGGGTTGGAC
GGGGCTCGGG CGCTCTTGCC CGAGGCGCTG GATACCGGGG TCTTGCGCAG CGATGGCAGC
ACCACCTTTC GGGGGCGGAA CCAAGCCGGG GAAGTACGGG TCTTTGCCAC CTTCACCCTG
CTGGAGGACG AGGTGCTGGT GATCGGCAGC TGGCCCGTCG GCGCCATCGG GACGGCCCCG
GCGCAGGGGC GGATGGCGGT GCTCTTCCCG CTGCTGATGT GGGCGGCTGG GGTGCTGGTG
GCCTATTTCG GGCTGCACCG TCTGGTGATC CGCCATGTGA GCGCGTTGCG GGATGCGATG
CGCCGCTTCG CCCTGGGGGA GCGGGACGTG GCGGCCCTGC AGCTCGACGC GCCCTCGACC
GAGTTCGCCC AGGCGCAGCG GGCCTTCAAC CGGATGGTTC TGATCCTGTC GGAGGCGGAG
GCCCGGCGGG AGCAGGATCT GCAGGACAAG GAGGTGTTGC TGCGCGAGGT GCATCACCGG
GTGAAGAACA ACCTGCAGAT GATCGCCTCG ATCATGAACA TGCAGAGCCG GACCGTCACC
GCGCCCGAGA CCAAGCGCGT GTTGCAGGGC TTGCAGCGGC GGGTGCAGGG GTTGGCGGCA
ATCCACCGGA CGCTGTATAC AACGACCGAG ATGACCTGCG TGGACGTGGC GGCCTTGGCC
GACGAGATGG TGTCGGAAGT CGCCGCCCTG GCCGGGCAGG GGGCGCGGGC GGTGACCGTG
CGGCGGGATC TGACGCCCTT GCAGCTCTAT CCCGACCAGG CGGTGCCCCT GTCCATGGTG
TTGTCGGAGA TGCTGACAAA TGCGTTCAAA TACGTGGGCC GGCCCGAGGA CGCGGCCGCG
CGGATCGACG TGACCCTGAA GGCCGCACCG GACGGGCGAG TGGAGCTGGC GGTGGAGAAT
ACGCGCGGCA CGCCCCTTGG CGAGGAACTG GACAATGACA GCACCGGCAT CGGCACCCGG
CTGATGCGGG CCTTCGTGAT GCAGCTCGAC GGGGTCGAGG AGGTCGAGGA CCTGCCGGAC
AGCTACAGGA TGGTGGTGCG GTTCCGCCCG GCGGAGTTCG TGCCCGATGC TGCCTGA
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| Protein sequence | MPETRARPEP VRLSLRSLPV RLIGLMTLAL LPLGLISLYQ TRSVIDRAED LARGALIAEA
RQAVALERRV LIEAVGAARG LGVALLPLLD DPARCSAVLG EFIDQSNQIV FAGFLPPDGV
MRCSSHGEEV DFSDFPGFAE LMAAPGLSFE VNEQGAVSGQ SVMIANVPIY AAGAFAGYVA
ISIPHAIVND LLPSQPAERG LEIVVLNRAG EVISASEGLD GARALLPEAL DTGVLRSDGS
TTFRGRNQAG EVRVFATFTL LEDEVLVIGS WPVGAIGTAP AQGRMAVLFP LLMWAAGVLV
AYFGLHRLVI RHVSALRDAM RRFALGERDV AALQLDAPST EFAQAQRAFN RMVLILSEAE
ARREQDLQDK EVLLREVHHR VKNNLQMIAS IMNMQSRTVT APETKRVLQG LQRRVQGLAA
IHRTLYTTTE MTCVDVAALA DEMVSEVAAL AGQGARAVTV RRDLTPLQLY PDQAVPLSMV
LSEMLTNAFK YVGRPEDAAA RIDVTLKAAP DGRVELAVEN TRGTPLGEEL DNDSTGIGTR
LMRAFVMQLD GVEEVEDLPD SYRMVVRFRP AEFVPDAA
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