| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_3826 |
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| Symbol | |
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| ID | 5714355 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009956 |
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| Strand | + |
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| Start bp | 32430 |
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| End bp | 34451 |
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| Gene Length | 2022 bp |
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| Protein Length | 673 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 641276741 |
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| Product | 3-hydroxyacyl-CoA dehydrogenase NAD-binding |
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| Protein accession | YP_001542037 |
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| Protein GI | 159046366 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1024] Enoyl-CoA hydratase/carnithine racemase
[COG1250] 3-hydroxyacyl-CoA dehydrogenase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.323832 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 0.908677 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGGGGGCA TCGTCGACAC GCGCGTGGAT ACCGACACCG GCCTCGCCTG GGTGACCGTG
GACAACCCGC CGGTCAATGC GACCTCGACC GCGGTGCGCC AGGGCCTGCT CGACGCCGTC
ACCCGGGTGC AGGGGGCGCG GCTGGCGATC CTGCGTTGCG CGGGCCGCAC CTTCATCGCC
GGCGGCGACA TGCGCGAGTT CGACGCCCCG CCGCAGCCGC CGGACCTTCC CGACGTGGTC
GACGCGATCG AGGCCAGCGC CACGCCCTTC GTCGCGGTGA TGCAGGGCAC GGTGCTGGGC
GGGGGGCTCG AAATCGCCAT GGGCTGCGCC TATCGCATCG CGGCGCCGGG CACACGGTTC
GGGCTGCCCG AGGTGACCGT CGGGCTGATC CCCGGCGCGG GCGGCACCCA GCGCGCGCCA
CGCCTGTTCG GCTGGGACGC GGCCATCGAC ATGGCCTGCG CGGGCAAGCT GCTGAGCGCG
CAGGAGGCCC ACGCCCGCGG CGCGCTCGAC GCCATCGCCG ACGACCCGGA GGCCGCCGCG
CGCGCCTTGG TGCCCGAGCC CCGGATCCCG GTCTCCGAAC GCCCCGCACC GCCGCCGCCC
GACAGCGCCC GGATCGCCGC GCACCGCCGC ACCTTGGCCG CGCGCGCCCG CGGGCAAACC
GCCCCCCTGC AGGCGCTCGA CGCACTGCTC TGGGCCACGG GGCCCTTCCG CGAAGGCCAG
CGGAAGGAAC GCGCGCTGCA CCTGTCCCTG CGCGCCTCCG ATCAAAGCCG CGCCCTGCGG
CATGCGTTCT TCGCCGAACG CACCGTGGCG CGCCCCGCGG TGATCCGGGA CAGGACACCG
CGCGAGATCG CCCGCATCGC GGTCATGGGC GGCGGGCTGA TGGGGGCGGG CATTGCCGCC
GCCTGCCTCG GCGCGGGCTA CCGGGTCGAC TTGCTGGAAC GGGACGCCGC CACCGCCGAG
GCGGCCCGCG ACCGGGTGCG GGGGCTGATC GCCGGGGCGC TGCGCCGTGG CAAGATCGAC
CAGGCCCGCC ATGACGCGCA CTGCGCGGCC CTGCGCACCG GGGTCGGTAT CGGGCACGCC
GCGGAGGCCG ATCTCGCCAT CGAAGCGGTG TTCGAAGAGA CCGCCACGAA ACGGGCGGCC
TTCGCCGCGC TGGCGCAGGT CATGGCCCCC GACGCGATCC TGGCAACCAA CACCTCCTAT
CTCGATCCGC GCGAGATCTT CGCGGGCATC CCCGCTCCCG ATCGCTGTCT CGGGCTGCAT
TTCTTCGCCC CGGCCCATGT GATGAAGCTG CTGGAGGTGG TGCGCCTGCC CGAGACCTCC
GCCGAGACCC TCGCCACGGC CTTCGCCCTG GCCGGGCGGC TGCGCAAGGT GGCGGTCCTG
TCGGGGATCT GCGACGGGTT CATCGGCAAC CGGATGCTCG CGGCCTACCG GCGGGCGGCG
GAATACATGC TGGCCGATGG CGCCCTGCCC GAGCAGATCG ACGGGGCCAT GCGCGCCTAC
GGCATGGCCA TGGGCCCGTT CGAGGCGCAG GATCTCAGCG GGCTGCACAT CGCCGAGGCC
AACCGCCGTC GACAGGACGC GACGCGCCCG GCGCGCGAAC GCTACGTCAC CCTGTCGGAC
CAGCTCTGTG CGCTGGGGCG GACCGGACAG CGCGCCGGCA AAGGCTGGTA TGCCTATGCC
GAGGGCGACC GCCGCCCCCG CGTCGACCCG GCGGTGACCG CCCTGATCAC CGACTATTCC
GCCGCGCACG GCCTGCCGCG CCGAACCCAT GACGCGGGCG AGATCCAGGC CCGGCTGCTG
GCGGTCCTGG CCAATGAAGG CGCGCGCCTG GTCGAGGAGG GCATCGCCGA CAGCGACGCC
GCCGTCGACA TGGTCAAGCT GCACGGCTAC GGCTTCCCGC GCTGGCGCGG CGGGCCGCTC
TTCGCCGCCC GACAGGCGGG CGATGCCACC ATCCGCGCCG CCCTCGATGC GCTCGACGCC
GCAAGCCCCG GCTCCTGGGT CCGGGCGCAG CGCTACCGCT GA
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| Protein sequence | MGGIVDTRVD TDTGLAWVTV DNPPVNATST AVRQGLLDAV TRVQGARLAI LRCAGRTFIA
GGDMREFDAP PQPPDLPDVV DAIEASATPF VAVMQGTVLG GGLEIAMGCA YRIAAPGTRF
GLPEVTVGLI PGAGGTQRAP RLFGWDAAID MACAGKLLSA QEAHARGALD AIADDPEAAA
RALVPEPRIP VSERPAPPPP DSARIAAHRR TLAARARGQT APLQALDALL WATGPFREGQ
RKERALHLSL RASDQSRALR HAFFAERTVA RPAVIRDRTP REIARIAVMG GGLMGAGIAA
ACLGAGYRVD LLERDAATAE AARDRVRGLI AGALRRGKID QARHDAHCAA LRTGVGIGHA
AEADLAIEAV FEETATKRAA FAALAQVMAP DAILATNTSY LDPREIFAGI PAPDRCLGLH
FFAPAHVMKL LEVVRLPETS AETLATAFAL AGRLRKVAVL SGICDGFIGN RMLAAYRRAA
EYMLADGALP EQIDGAMRAY GMAMGPFEAQ DLSGLHIAEA NRRRQDATRP ARERYVTLSD
QLCALGRTGQ RAGKGWYAYA EGDRRPRVDP AVTALITDYS AAHGLPRRTH DAGEIQARLL
AVLANEGARL VEEGIADSDA AVDMVKLHGY GFPRWRGGPL FAARQAGDAT IRAALDALDA
ASPGSWVRAQ RYR
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