| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_3822 |
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| Symbol | |
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| ID | 5714351 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009956 |
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| Strand | + |
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| Start bp | 28782 |
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| End bp | 29852 |
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| Gene Length | 1071 bp |
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| Protein Length | 356 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641276737 |
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| Product | phenylacetate-CoA oxygenase/reductase, PaaK subunit |
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| Protein accession | YP_001542033 |
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| Protein GI | 159046362 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1018] Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 |
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| TIGRFAM ID | [TIGR02160] phenylacetate-CoA oxygenase/reductase, PaaK subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.0510949 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 0.275552 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCCGTT TTCATCCCCT GTCAGTCACG GATGTCCGCA AGACCATTCG CGACGCGGTC
GTGGTGACCC TGAAACCCGT CGACGGGGGC GATTTCGGGT TCATCCAGGG GCAGTACCTG
ACCTTCCGGC GGTCCTTCGA CGGCACCGAG CTGCGCCGCT CCTACTCGAT CTGCGCCGGA
CGGGATGACG GCGTGCTTCA GGTCGGCATC AAGCGGGTCG AGGGCGGCGC GTTCTCGACC
TGGGCCAATG ACAGCCTCGC GCCCGGCATG ACCCTGGAGG CGATGGCGCC GATGGGCAGC
TTCCACACGC CCCTCGACCC GCACACGCCC CGCAACTATC TCGCCTTCGC CGGGGGGTCG
GGCATCACGC CGATCCTGTC GATCCTGAAG ACCGTGCTCG CCCGGGAGCC CGGCAGCCGC
TTGACGCTGG TCTATGCCAA CCGGGGTGTG AACACGATCA TGTTCCGCGA GGAGCTGGAG
GATCTCAAGA ACCTGCACAT GGGGCGGCTG ACCGTGATCC ATGTGCTGGA AAGCGACGCG
CAGGAGATCG ACCTGTTCAC CGGCCGGGTC GACGGGGCGA AATGCGACGC CCTGTTCGCC
CACTGGATCG ACATCGACAG CATCGACACC GCCTTCATCT GCGGGCCCGA ACCGATGATG
CTGGGCATCG CGGCGGCGCT GCGGGCGCAC GGGATGACCG ACGACCGGAT CAAGTTCGAA
CTTTTCGCCA GCGGCCAGCC CGGGCGCCTG CCGCGCAAAC CCGGCGCCGC CGCCGGTCAC
GACCCCGAGG CCCGGGCGAC CGCGGCCACC GTCACCATGG ACGGCGCGGC GCGCAGCTTT
GCCATGGACA AGGACCAGTC GATCCTCGAC GCGGCGCTCG CGAACGCACT GGATGCGCCC
TATGCCTGCA AGGCCGGGGT CTGCTCCACC TGCAAGTGCA AGGTGCTGGA GGGCGAGGTG
GAGATGATCG CCAACCACGC GCTGGAAGAT TACGAGGTGG CAAGGGGGTA CGTGCTGTCC
TGCCAGTCCT ACCCGGTGAC GGACCGGGTT GTGGTGACCT ACGACCACTA G
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| Protein sequence | MARFHPLSVT DVRKTIRDAV VVTLKPVDGG DFGFIQGQYL TFRRSFDGTE LRRSYSICAG
RDDGVLQVGI KRVEGGAFST WANDSLAPGM TLEAMAPMGS FHTPLDPHTP RNYLAFAGGS
GITPILSILK TVLAREPGSR LTLVYANRGV NTIMFREELE DLKNLHMGRL TVIHVLESDA
QEIDLFTGRV DGAKCDALFA HWIDIDSIDT AFICGPEPMM LGIAAALRAH GMTDDRIKFE
LFASGQPGRL PRKPGAAAGH DPEARATAAT VTMDGAARSF AMDKDQSILD AALANALDAP
YACKAGVCST CKCKVLEGEV EMIANHALED YEVARGYVLS CQSYPVTDRV VVTYDH
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