| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_3813 |
|---|
| Symbol | |
|---|
| ID | 5714342 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dinoroseobacter shibae DFL 12 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009956 |
|---|
| Strand | - |
|---|
| Start bp | 21527 |
|---|
| End bp | 21970 |
|---|
| Gene Length | 444 bp |
|---|
| Protein Length | 147 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 641276728 |
|---|
| Product | MarR family transcriptional regulator |
|---|
| Protein accession | YP_001542024 |
|---|
| Protein GI | 159046353 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1846] Transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.363185 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 40 |
|---|
| Fosmid unclonability p-value | 0.48019 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAGACCC CAGCCCCGGA TTTCGACCTG GAACGCTACT TGCCCTACCG GCTGACCGTG
ATCGCCGGGC GGCTCAGCGC CGAGATCGCG CGGCAATACA AGGCGCGGTT CGGGATCTCT
CTGCCGGAGT GGCGCGTGCT GCTGAATGTC GGCCATGCGG AGAACCTGTC GATCCGCGAT
ATCGAGAAAC GCGCCGACCT GGAGAAATCC AAGGTCAGCC GCGCGGCCTC GAAACTCGAA
GCGAAGGGCT ATCTGCGCAA GCATGTGGAT ACGCAGGACA AGCGGCTGCT TCAGCTGTCC
CTGACCGAGG AGGGACGGCA ATTGCTCGAT GCACTGATCC CCATCGCGGC GGCGTTCCAG
GCTGATCTCG ACGCGCGGCT CGGGGGCCAT CGCGACGCGT TGCACGAGGC GCTCGACCGG
CTGCTGCCCG CCGAAGAGGC CTGA
|
|---|
| Protein sequence | MQTPAPDFDL ERYLPYRLTV IAGRLSAEIA RQYKARFGIS LPEWRVLLNV GHAENLSIRD
IEKRADLEKS KVSRAASKLE AKGYLRKHVD TQDKRLLQLS LTEEGRQLLD ALIPIAAAFQ
ADLDARLGGH RDALHEALDR LLPAEEA
|
|---|
| |