Gene Dshi_3806 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_3806 
Symbol 
ID5714335 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009956 
Strand
Start bp15829 
End bp16182 
Gene Length354 bp 
Protein Length117 aa 
Translation table11 
GC content65% 
IMG OID641276721 
Productputative monovalent cation/H+ antiporter subunit C 
Protein accessionYP_001542017 
Protein GI159046346 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1006] Multisubunit Na+/H+ antiporter, MnhC subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value0.397462 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGATCC TGGTTGCCAG CACCGTTGCC GTTCTGACCG CGGGGGGGGT GTACCTGCTG 
CTGCGGCTGC GGACCTTCCC GATCATCCTG GGCCTCGCCC TGCTGTCCTA CGCGGTGAAC
GTGTTCCTGT TCGCCAGCGG GCGGTTGGCC ATCGACCAGT CGCCGATCCT GTCGAAATAC
GGCGATGCGA GCTATTCCGA CCCGCTGCCC CAGGCGCTGG TGCTGACGGC GATCGTGATT
TCCTTCGGGA TGACGGCGGT TCTGGTGATG ATCGGGCTCG GCGCCTACCT GGAATCCGAG
ACCGACCGGA TCGACATCGA GGATGAGGAT ACCCGCGAGG AGGGCCAGCC ATGA
 
Protein sequence
MEILVASTVA VLTAGGVYLL LRLRTFPIIL GLALLSYAVN VFLFASGRLA IDQSPILSKY 
GDASYSDPLP QALVLTAIVI SFGMTAVLVM IGLGAYLESE TDRIDIEDED TREEGQP