| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_3805 |
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| Symbol | |
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| ID | 5714334 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009956 |
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| Strand | + |
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| Start bp | 12918 |
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| End bp | 15827 |
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| Gene Length | 2910 bp |
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| Protein Length | 969 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641276720 |
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| Product | putative monovalent cation/H+ antiporter subunit A |
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| Protein accession | YP_001542016 |
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| Protein GI | 159046345 |
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| COG category | [C] Energy production and conversion
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG1009] NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit
[COG2111] Multisubunit Na+/H+ antiporter, MnhB subunit |
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| TIGRFAM ID | [TIGR00943] monovalent cation:proton antiporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 0.761799 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTCACG AGGGCAGCTT CCTCTTCATC ATCGCGCTGC TGCCATTTCT GGGTGCCTTG
GTGCCGGGAT TGATGATCCG GGCCGGGCGC ACCGCCTGCG CGTCTTTCAC GGCGGTGCCC
ACGGCGCTGG CCTTCATCAT GCTGCTGATC CTGTCTCCCG CGGTGCTGCG CGGGGAGGTG
ATCACCGCCG AGATCGGCTG GCTGCCGCAG CTGGGGCTGT CGGCGTCGTT CTTCCTCGAC
GGTCTGGGGC TGCTCTTTGC GCTGATGATC ACGGGCGTCG GGCTGCTGAT CATCCTCTAT
GCGCGGTTCT ACCTGTCGGG CGACGATCCG ATGGGGCAGT TCTATACCTA CCTGTTGCTG
TTCCAGGGCG CGATGCTGGG GATCGTGCTG TCGGACAACA TATTGCTGTT GCTGATTTTC
TGGGAGCTGA CCTCGCTCAG CTCCTTCCTG CTGATCGGGT ATTGGAAGCA TCTGCCCGAG
GGGCGTCAGG GCGCGCGGAT GGCGCTGGCC GTGACCGGGG CAGGGGGCCT GGCGATGATC
GGGGGGATGC TGATCCTCGG GAACATCGTG GGCAGCTATA ACCTGACCGA TATCCTGCAG
GCGGGCGAGC AGATCCGGGC GTCCGAGTGG TACCTGCCCG CGCTGATCCT GATCCTGCTC
GGCGCCTTCA CCAAATCGGC GCAATTCCCG TTCCATTTCT GGTTGCCGCA CGCCATGGCC
GCGCCCACGC CGGTCTCGGC CTATCTGCAC TCGGCGACCA TGGTGAAGGC GGGCGTGTTC
CTGATGGCAC GCATGTGGCC GGTGCTGGCG GGAACCGATG CGTGGTTCTA CATCGTGGCG
ACCACGGGTC TGGTGACCAT GGTGATGGGC GCGGGCATCG CGCTGTTCAA GGATGACCTC
AAGGCGCTGC TGGCGTTTTC CACGGTCAGC CACCTGGGCC TTCTGACCAT GCTGCTGGGC
TTCGGCACGC AGGCAGCGGC GGTGGCGGCG GTGTTTCACA TCATCAACCA CCTGACCTTC
AAGGCCGCGC TCTTCATGAC CGCGGGGATC GTGGATCACG AAACGCACAC GCGGGATATC
AAGCGGCTCG GGGGCTTGCG GCACCTGATG CCGATCACCT TCGCGATCGG GACGGTGGCG
GCCCTGTCCA TGGCGGGCAT ACCGCTCTTC AACGGGTTCC TGTCGAAAGA GATGATGCTG
GAGGAGGCGT CGCATACGGG CTGGCTCGGC AATCCCTGGG TGGTGCCGGT GGTGGCGACC
TTCGGCGCGC TCTTGTCGGT GGCCTATTCG TTCCGGTTCA TTGGTCATGT GTTTCTCGGG
CCGGTGCGGG ATGACTACCC CGCCAAGCCC CATGATCCGC CCTTCGGGAT GTGGGCCTCG
CCTGCGTTGC TGGTGGTGCT GGTCCTGGTG ATCGGGATGG CGCCGTTTGT GGCCGAGGGG
ATCGTGACGG CGGCGTCCAG TGCCGTGACC GGCGCGGATC TGCACCCGCA TCTGAAGATC
TGGCACGGGT TCACGCCCGC CTTGTGGATG TCGGTGGTGG CGACCCTGGG CGGTCTGATG
CTGCTGGCGC TGCATGGCAA GCTCGATCCG ATCTGGCAGG CGGCGCGCCG CCCGGAGGCC
AAGGCGATCT TCGACGGGTT GGTGGCGGGG CTCGTGGCGC TGACGCGCGG GATCACCGAG
CGCACCCACA CGGGCAAGAT CAGTGCCTAT CTCGCGCTCT TCACGGTGTC TTCCGTGGCG
CTCGGCTGGA TCGCCTATGC GGGCAGCGGG CTGTCGCTGC CCACGCGTGA GTTGTTGCCG
GTGCCGCCGG TGATCGCGGT GGGCTGGCTG ATGCTGGTGG TGGCGACCGC GTCGGTCGTG
GTCATGCATC ATCAAAGGTT CCAGGCGCTG ATCCTGATCG GGATCATCGG TTTGTCGATC
TCGGCGGGCT TTGTCTACCT GTCGGCGCCG GACCTCGCCC TGACCCAGGT GTCGGTCGAG
ACCGTGACCA TCATGCTGCT GCTGCTGGCG CTGCATTTCC TGCCCAAGAC CACGCCGAAG
GAAAGCAGCC TCGGCCGCAA GATCCGCGAC GGGGCGATTG CCGTGACCGC CGGCGGCGGG
GTGGGGGCGC TGGCCTTTGC GTTCCTGCTG CGCGACGTGG AGACGATTTC CGGCTTCCAC
CTGGAGAACA GCTACGAGGG CGGGGGCGGC ACCAATGTTG TCAACGTGAT CCTCGTGGAT
TTCCGGGGCT ACGATACCTA TGGCGAGATC ATCGTGCTGG GGATCGCGGG GCTCGTGATC
TATGCGCTGA TGCAGGCGCT GCTGGACGGG CCCGCGGCGC GGCGGCTGCG GAGCGGCGAT
TTCTCCAACG ACCGCTCGCG CGACCGGCAT CCGATGATGA TGGTGGTGGT CACCCGGGTC
CTGATGCCCA TCGCGGTGGT CGTGGGGCTC TATATCTTCC TGCGCGGCCA TAATGAGCCG
GGCGGCGGCT TCGTCGCGGG GCTGGTGATC GCCATCGCGC TTCTGATGCA ATACATGGCC
TCGGGCTTTG CCTGGACGCA GGAGCGCAAG CGGATCGAGT ACCACACCAT GATCGGGCTC
GGGGTGATCA TCGCCGGGTT GACCGGGGCA GGCGCGTGGC TGCTAGGCCG GCCCTTCCTG
ACCAGCGCCT ATACATATAT AAACCTGCCC CCCATCGAGG AGTTCGAGCT GGCCACCGCC
ATGCTGTTCG ACCTGGGCGT GTTCCTGACC GTCCTCGGCG CGGTGATGCT GATGCTCTAC
AGTCTGAGCC GGATCGCGCG GTTCGCGGGC GAGACGGTGA ACACCGGGCC GATGGATTAC
GACCCCGCGG TGAAGGGGAG TGTGGGCACG CCGCCGCGCC CGGCGGAGCC GCCCACCCCC
GTGCGCCCCG GACCGGAAGG AGCCCGCTGA
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| Protein sequence | MSHEGSFLFI IALLPFLGAL VPGLMIRAGR TACASFTAVP TALAFIMLLI LSPAVLRGEV
ITAEIGWLPQ LGLSASFFLD GLGLLFALMI TGVGLLIILY ARFYLSGDDP MGQFYTYLLL
FQGAMLGIVL SDNILLLLIF WELTSLSSFL LIGYWKHLPE GRQGARMALA VTGAGGLAMI
GGMLILGNIV GSYNLTDILQ AGEQIRASEW YLPALILILL GAFTKSAQFP FHFWLPHAMA
APTPVSAYLH SATMVKAGVF LMARMWPVLA GTDAWFYIVA TTGLVTMVMG AGIALFKDDL
KALLAFSTVS HLGLLTMLLG FGTQAAAVAA VFHIINHLTF KAALFMTAGI VDHETHTRDI
KRLGGLRHLM PITFAIGTVA ALSMAGIPLF NGFLSKEMML EEASHTGWLG NPWVVPVVAT
FGALLSVAYS FRFIGHVFLG PVRDDYPAKP HDPPFGMWAS PALLVVLVLV IGMAPFVAEG
IVTAASSAVT GADLHPHLKI WHGFTPALWM SVVATLGGLM LLALHGKLDP IWQAARRPEA
KAIFDGLVAG LVALTRGITE RTHTGKISAY LALFTVSSVA LGWIAYAGSG LSLPTRELLP
VPPVIAVGWL MLVVATASVV VMHHQRFQAL ILIGIIGLSI SAGFVYLSAP DLALTQVSVE
TVTIMLLLLA LHFLPKTTPK ESSLGRKIRD GAIAVTAGGG VGALAFAFLL RDVETISGFH
LENSYEGGGG TNVVNVILVD FRGYDTYGEI IVLGIAGLVI YALMQALLDG PAARRLRSGD
FSNDRSRDRH PMMMVVVTRV LMPIAVVVGL YIFLRGHNEP GGGFVAGLVI AIALLMQYMA
SGFAWTQERK RIEYHTMIGL GVIIAGLTGA GAWLLGRPFL TSAYTYINLP PIEEFELATA
MLFDLGVFLT VLGAVMLMLY SLSRIARFAG ETVNTGPMDY DPAVKGSVGT PPRPAEPPTP
VRPGPEGAR
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