Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dshi_3801 |
Symbol | |
ID | 5714330 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dinoroseobacter shibae DFL 12 |
Kingdom | Bacteria |
Replicon accession | NC_009956 |
Strand | - |
Start bp | 8358 |
End bp | 10535 |
Gene Length | 2178 bp |
Protein Length | 725 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641276716 |
Product | catalase/peroxidase HPI |
Protein accession | YP_001542012 |
Protein GI | 159046341 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0376] Catalase (peroxidase I) |
TIGRFAM ID | [TIGR00198] catalase/peroxidase HPI |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.409615 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 0.295897 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACGGCA ACGATCTGCG CAATGTCACG GGATGCCCCG TCATGCATGG CGGCAACACC GGCATGAACA CCAGCCCCGT GCGCTGGTGG CCCAACGCGC TCAACTTGGA CATCCTGCAC CAGCATGGCG CCCGGGTCAG CCCGATGGAC CCCGATTACG ACCACCGCGA GGCGGTGAAG GCTCTCGATT TCCAGGGCGT CTGGGATGAC GTGGACAAGC TGCTGACCGA CAGCCAGGAC TGGTGGCCGG CCGACTGGGG GCACTATGGT GGCCTCTTCA TTCGCCTGTC GTGGCATGCC GCGGGCTCCT ACCGTCTGGG CGACGGCCGT GGCGGGGCCG GCACCGGCAA CCTGCGGTTC GAGCCGCTGA ACTCCTGGCC CGACAATGCC AGCCTCGAGA AAGCCCGCCG CCTGCTCTGG CCGGTGAAGA AGAAATACGG CAACGCGCTG TCCTGGGCGG ACCTTCTGGT GCTCGCCGGG ACCGTGGCCT ACTCCAACAT GGGGCTCAAG ACCTTCGGCT TCGCCTTTGG CCGCAAGGAC ATCTGGGGCC CCGAGATCGA CATCAACTGG GGCAGCGACA GCGAGATCCT CGCCCCCACG GACGAGCGTG TGACCGATGT GGCCGACGCC AACTCCATGG CCAATCCCCT GGCCGCGTCC CATATGGGCC TGATCTACGT GAACCCCGAG GGGGTGAACG GCACGCCCGA TCCGGCCCAG ACCGCGAAAT ACGTGCGCAT GACCTTCGCG CGCATGGCGA TGAATGACGA GGAAACCGCC GCCCTGACCG TGGGCGGGCA CACCGTGGGC AAGGCCCATG GCGGCACGAT GGCCGACAAG GTCGGCGCGG ATCCCGCCGG TTGCCCGGTG CACATGCAGG GCTTCGGCTG GGAAAACCCG GGCTTCGACG GCAACGCCAA CACCGCCCAT ACCTCGGGGC TCGAAGGTGC GTGGACCTCC AACCCGACCC AATGGGACAA CGGCTATCTA GAGTTGCTGT TCAAGTATGA CTGGGAAGTC ACGAAATCCC GCGCAGGCGC CTTCCAGTGG GAGCCGGTCA ACATCGCCGA GGAGGACATG GTCCCCGACG CCACCGACCC CTCGATCAAG CACAATCCGA TCATGACCGA CGCCGACATG GCGATGAAGG TCGATCCGAT CTATCGCGAG ATCTGCGAGC GGTTCCACAA GGATCCGGAC TACCTCGCCG ACACCTTCGC GCGCGCCTGG TTCAAGCTGA CCCACCGCGA CATGGGGCCC AAGGCCAACT ACTACGGCCC CTTCGTGCCG CAAGAGGACC TGATCTGGCA GGATCCGATC CCCGAAGGCC CCACCGGCTA TGACGTGGAC GCGCTCAAGG CCAAGATCGC CGAAAGCGGG CTGAGCGCCG CCGAAATGAT CGCCACCGCC TGGGACAGCG CGCGGACCTT CCGCGGCTCT GACATGCGCG GCGGAGCCAA CGGCGCCCGC ATCCGCCTCG TGCCCCAAAA GGACTGGGCT GGCAACGAGC CGGAGCGTCT GGCCAAGGTC CTCGGCATTC TGGAGCCGCT GGCAGCGGCC GCCGGAGCCT CCATCGCGGA TACCATCGTG CTGGCGGGCA ATGTCGGCAT CGAGATGGCG ATCAAGGCCG CGGGCCAGGA TGTGCCGGTG CCCTTCGCAC CGGGCCGGGG CGACGCCACG GATGCCATGA CCGATGCCGA AAGCTTCGAG GTGATGGAAC CCTTCGCCGA CGGCTTCCGC AACTGGTCGA AAGAGCGGTA CTCCGTCAGC CCCGAAGAGC TGATGCTCGA CCGCGCGCAG CTGCTGGGCC TGACGGCGGC GGAAATGGCC GTGCTCGTCG GCGGGCTCCG GGTGCTCGGG GCCAACCATG GCGGCAGCGC CCATGGCGTC TTCACCGACC GGGTCGGCAC GCTGACCACG GATTTCTTCC AGACCATCAC CGACATGGCC TATAAATGGG TCCCGCTCGA CGATGGCACC TACGAGATCC GCGACCGCAA GTCCGGCGAC ACCGTCTACA CCGCGACCAG CGCGGACCTG GTCTTCGGCT CCAACTCGCA ACTGCGGGCC ATTGCCGAGG TCTACGCCCA GGACGACAAC GAGACGAAAT TCGTCCGTGA TTTCGTCGCC GCCTGGACCA AGGTGATGAA CGCCGACCGG TTCGACCTGC TGGCCTGA
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Protein sequence | MDGNDLRNVT GCPVMHGGNT GMNTSPVRWW PNALNLDILH QHGARVSPMD PDYDHREAVK ALDFQGVWDD VDKLLTDSQD WWPADWGHYG GLFIRLSWHA AGSYRLGDGR GGAGTGNLRF EPLNSWPDNA SLEKARRLLW PVKKKYGNAL SWADLLVLAG TVAYSNMGLK TFGFAFGRKD IWGPEIDINW GSDSEILAPT DERVTDVADA NSMANPLAAS HMGLIYVNPE GVNGTPDPAQ TAKYVRMTFA RMAMNDEETA ALTVGGHTVG KAHGGTMADK VGADPAGCPV HMQGFGWENP GFDGNANTAH TSGLEGAWTS NPTQWDNGYL ELLFKYDWEV TKSRAGAFQW EPVNIAEEDM VPDATDPSIK HNPIMTDADM AMKVDPIYRE ICERFHKDPD YLADTFARAW FKLTHRDMGP KANYYGPFVP QEDLIWQDPI PEGPTGYDVD ALKAKIAESG LSAAEMIATA WDSARTFRGS DMRGGANGAR IRLVPQKDWA GNEPERLAKV LGILEPLAAA AGASIADTIV LAGNVGIEMA IKAAGQDVPV PFAPGRGDAT DAMTDAESFE VMEPFADGFR NWSKERYSVS PEELMLDRAQ LLGLTAAEMA VLVGGLRVLG ANHGGSAHGV FTDRVGTLTT DFFQTITDMA YKWVPLDDGT YEIRDRKSGD TVYTATSADL VFGSNSQLRA IAEVYAQDDN ETKFVRDFVA AWTKVMNADR FDLLA
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