Gene Dshi_3800 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_3800 
Symbol 
ID5714329 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009956 
Strand
Start bp7685 
End bp8299 
Gene Length615 bp 
Protein Length204 aa 
Translation table11 
GC content73% 
IMG OID641276715 
Producthypothetical protein 
Protein accessionYP_001542011 
Protein GI159046340 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value0.3296 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGGCTTG CGACATGGGG CGTCTGGCTC TTCGGGCTGG GCGTCGCGGG GCCTGCGCGC 
GCCCATAGCC CGGCCCCGGG GGTGGAGGGG TTTTTCCTCG GCCTGGCGCA TCCATTCTCG
ACGCCCGGGC AGGTCGTTGT GATCCTGGCG CTTGCGCTGG TGGTGGGCGG CTTCGCGACC
CGTCTTGTGC CCTGGATGCT GGGCGTGTTC TTTGCCGCCG GTTTTGCATC GCTGCTGCCG
GGGCCGGTTC TGGCGGCGCT GGAGGTGCCG CTGTTTGCCG TGGGCCTGGT GGCCGCGGTG
GCTGCGGCGA GCCTGCCGGG GCAGGGGGCG GCGGTGGCGT TCGGGCTGCT GGTACTGGGG
GGTGGGCTGA TCGGGCAGGC CTCGATCCCC GGACCGGGAC CGGTGCAGGA CCGGATCGTC
ACCATGGCGG GTGCGATCAC CGGGGCGAGC CTCGGGCTGG CCTACGGGGT CGGGTTGCTG
GTGGTGCTGC GGGAGAAGAT GCGCGCGCCC TGGGTGGCGA TCGGGCTGCG GGTGCTGGCG
GCGTGGATCG CGGCTGTCGC GGCCCTGATG CTGGCGCTGG TCTTCGCGCC GGGGGCGGAG
GTGGCGCCGC TCTGA
 
Protein sequence
MRLATWGVWL FGLGVAGPAR AHSPAPGVEG FFLGLAHPFS TPGQVVVILA LALVVGGFAT 
RLVPWMLGVF FAAGFASLLP GPVLAALEVP LFAVGLVAAV AAASLPGQGA AVAFGLLVLG
GGLIGQASIP GPGPVQDRIV TMAGAITGAS LGLAYGVGLL VVLREKMRAP WVAIGLRVLA
AWIAAVAALM LALVFAPGAE VAPL