Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dshi_3800 |
Symbol | |
ID | 5714329 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dinoroseobacter shibae DFL 12 |
Kingdom | Bacteria |
Replicon accession | NC_009956 |
Strand | + |
Start bp | 7685 |
End bp | 8299 |
Gene Length | 615 bp |
Protein Length | 204 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 641276715 |
Product | hypothetical protein |
Protein accession | YP_001542011 |
Protein GI | 159046340 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 39 |
Fosmid unclonability p-value | 0.3296 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGAGGCTTG CGACATGGGG CGTCTGGCTC TTCGGGCTGG GCGTCGCGGG GCCTGCGCGC GCCCATAGCC CGGCCCCGGG GGTGGAGGGG TTTTTCCTCG GCCTGGCGCA TCCATTCTCG ACGCCCGGGC AGGTCGTTGT GATCCTGGCG CTTGCGCTGG TGGTGGGCGG CTTCGCGACC CGTCTTGTGC CCTGGATGCT GGGCGTGTTC TTTGCCGCCG GTTTTGCATC GCTGCTGCCG GGGCCGGTTC TGGCGGCGCT GGAGGTGCCG CTGTTTGCCG TGGGCCTGGT GGCCGCGGTG GCTGCGGCGA GCCTGCCGGG GCAGGGGGCG GCGGTGGCGT TCGGGCTGCT GGTACTGGGG GGTGGGCTGA TCGGGCAGGC CTCGATCCCC GGACCGGGAC CGGTGCAGGA CCGGATCGTC ACCATGGCGG GTGCGATCAC CGGGGCGAGC CTCGGGCTGG CCTACGGGGT CGGGTTGCTG GTGGTGCTGC GGGAGAAGAT GCGCGCGCCC TGGGTGGCGA TCGGGCTGCG GGTGCTGGCG GCGTGGATCG CGGCTGTCGC GGCCCTGATG CTGGCGCTGG TCTTCGCGCC GGGGGCGGAG GTGGCGCCGC TCTGA
|
Protein sequence | MRLATWGVWL FGLGVAGPAR AHSPAPGVEG FFLGLAHPFS TPGQVVVILA LALVVGGFAT RLVPWMLGVF FAAGFASLLP GPVLAALEVP LFAVGLVAAV AAASLPGQGA AVAFGLLVLG GGLIGQASIP GPGPVQDRIV TMAGAITGAS LGLAYGVGLL VVLREKMRAP WVAIGLRVLA AWIAAVAALM LALVFAPGAE VAPL
|
| |