| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_3794 |
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| Symbol | |
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| ID | 5714323 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009956 |
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| Strand | + |
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| Start bp | 2862 |
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| End bp | 3749 |
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| Gene Length | 888 bp |
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| Protein Length | 295 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641276709 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_001542005 |
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| Protein GI | 159046334 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 0.258326 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGGTAA CGGCATCCGA GATAAGCCTG ATCGCACAGG CCGAGAAGCC CGAGGGCTAC
TGGCGGTCGG TCGGACGGCG CTTCATGCGC GACAAGGTGG CGGTGGGCGC GGGGCTCGTC
GCCGGGGGGC TGATCCTGAT GGCGGTCTTT GCGCCCTGGA TCGCGCCGCA GGACCCGCTG
GACGGGAGCA TGATGGACCG GCTGTCGCCC ATCGGGACCG AGGGCTATCC CCTGGGTGCG
GACGAGTTGG GCCGCGACAT GCTGAGCCGG CTGATCTACG GCGCGCGATT GTCCCTGTTC
ATGGGGGTGA CGCCGGTTCT GATCGCGTTC TTCATCGGCT CGGCCATCGG GATCGCGGCG
GGCTATGCGG GGGGCTGGGT GAACTCGGCC ACCATGCGGG TGCTCGATGT TCTGTATGCC
TTCCCGTCCG TCCTGCTGGC GATTGCGATT TCCGGCGCGC TGGGGGCGGG GATCGCCAAC
GGGCTTCTGT CGCTGACGGT GGTGTTCATC CCGCCGATTG CGCGGGTCGC CGAGAGCGTG
ACCACCGCGG TGCGGGAGCT GGAATACGTG GAGGCCGCCA AGGCCAGCGG GGCCTCGGCC
CTGTCCATCG TGCGCCACCA TGTGCTGGGC AATGTGCTGG GCCCGATCTT CGTCTATGCC
ACCAGCCTGA TTTCCGTGTC GATGATCCTG GCGGCCGGTC TGTCCTTCCT GGGCCTGGGC
GTGAGCCCGC CCAACGCGGA ATGGGGGCTG ATGCTGAACA CGCTGCGCAA CGCGATCTAC
GTGCAGCCTT GGCTGGCGGC CCTGCCGGGG GTGATGATCT TCCTCACGTC GATTTCCTTC
AACATGCTCA GTGACGGACT GCGCTCTGCC ATGGATATCA AGCAATGA
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| Protein sequence | MAVTASEISL IAQAEKPEGY WRSVGRRFMR DKVAVGAGLV AGGLILMAVF APWIAPQDPL
DGSMMDRLSP IGTEGYPLGA DELGRDMLSR LIYGARLSLF MGVTPVLIAF FIGSAIGIAA
GYAGGWVNSA TMRVLDVLYA FPSVLLAIAI SGALGAGIAN GLLSLTVVFI PPIARVAESV
TTAVRELEYV EAAKASGASA LSIVRHHVLG NVLGPIFVYA TSLISVSMIL AAGLSFLGLG
VSPPNAEWGL MLNTLRNAIY VQPWLAALPG VMIFLTSISF NMLSDGLRSA MDIKQ
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