| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_3791 |
|---|
| Symbol | |
|---|
| ID | 5714320 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dinoroseobacter shibae DFL 12 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009955 |
|---|
| Strand | - |
|---|
| Start bp | 189737 |
|---|
| End bp | 190501 |
|---|
| Gene Length | 765 bp |
|---|
| Protein Length | 254 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 641276706 |
|---|
| Product | glutaredoxin |
|---|
| Protein accession | YP_001542002 |
|---|
| Protein GI | 159046330 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0695] Glutaredoxin and related proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.0378197 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.280693 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCCCGCG ACACAGACAG TAAATCCGCG CAGCTTTATC GCATGGTCAT GCCGGGCCAT
GTCTGCCCCT ACGGTCTGAA ATCGAAAGAC CTGCTGGAGC GGCAAGGCTT CGAGGTGGAA
GACCATCCGC TTGACACCCG TGAAGACACC GATGCTTTCA TGGAGAAGCA CGGGGTCGAG
ACGACGCCGC AGACTTTCAT CGGGGACGAA CGGATCGGCG GTTACGATGA TCTCAGGGTG
TTTTTCGACA TTGACCCACC CGAGGAAGAG CAAAGCGACA CGACCTACCA GCCGGTCATC
GCGATCTTTT CCGTTGCCGC GCTGTTGGCA TTGGGCCTGT CTTGGCACCA GTACGGGTCG
GTCCTTACCT TGCGGGGGTT CGAATGGTTC ATTTCGCTGT CCATGACCAT TCTCGCGATC
CAGAAATTGC AGGATGTCGA AGGGTTTTCG ACGATGTTCC TCAACTACGA TCTGCTGGCG
CGCAAATGGG TGCGATACGG CAAGGTCTAC CCGTTCGGCG AAGCGTTGGC AGGTGTCCTG
ATGACTGCCG GCGCGCTGCT GTGGCTCTCG GCGCCTGTCG CCCTGTTTAT CGGCACGGTC
GGCGCTGTCA GCGTGTTCAA GGCTGTTTAT ATCGACAAGA GAGAGCTGAA ATGCGCCTGC
GTCGGCGGTG ACAGTTCCGT CCCGCTGGGG TTCATTTCGC TGACGGAAAA CCTGATGATG
ATCTTCATGG GTATCTGGAT GCCGGTCCGC GCGATCTGGT TCTGA
|
|---|
| Protein sequence | MPRDTDSKSA QLYRMVMPGH VCPYGLKSKD LLERQGFEVE DHPLDTREDT DAFMEKHGVE
TTPQTFIGDE RIGGYDDLRV FFDIDPPEEE QSDTTYQPVI AIFSVAALLA LGLSWHQYGS
VLTLRGFEWF ISLSMTILAI QKLQDVEGFS TMFLNYDLLA RKWVRYGKVY PFGEALAGVL
MTAGALLWLS APVALFIGTV GAVSVFKAVY IDKRELKCAC VGGDSSVPLG FISLTENLMM
IFMGIWMPVR AIWF
|
|---|
| |