| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_3785 |
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| Symbol | |
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| ID | 5714314 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009955 |
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| Strand | + |
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| Start bp | 183791 |
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| End bp | 185185 |
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| Gene Length | 1395 bp |
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| Protein Length | 464 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 641276700 |
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| Product | multicopper oxidase type 3 |
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| Protein accession | YP_001541996 |
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| Protein GI | 159046324 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG2132] Putative multicopper oxidases |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.396478 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.420222 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGACAAA CACGTCGGGA TTTCTTGCGC CATGCAACAC TGGCGGCCTG CGCGGCGGCC
ATCCCGCAGT CGGCTTTTGC CGCGACCCCG TTCGAGGACC TGATTGCCAA GGTTGCACGT
CGACAGCTTC TTCCGGACAC CTACCCGGAA ACAGAGATCT GGGGCTATGA CGGCCTCGTT
CCGGCCCCGG AAATCAGGGT CACACAAGGC GATCGGGTGC GTCGCAGGTT TCGCAACGAG
GTACCCGATC CCAGTTCGGT TCACTGGCAC GGAATCCGGA TCGACAACGC GATGGATGGC
GTTTCAGGGC TGACCCAAGA GGCCGTAGCG CCGGGTGGAA CCTTTGACTA CGACTTCGTC
GTACCGGACG CGGGCACCTA TTGGTATCAC GCGCATAATC GCTCATACGA GCAAGTCGCG
CGTGGTCTGC GCGGTGCCTT GATCGTCGAA GAGGTCGATG GACCGGACAT CGACCGCGAG
GAAGTCATCG TTCTGGAGGA CTGGTTGCTC GACCCTGAGA GCGGGCAGCT GTTCGACAAT
TTCGAACAGC CCATGATGAT GAGCCACGGT GGACGTACCG GCAACTTTAT CACGACCAAC
GGGCGCTATG ACCTGACCTT GCCCGCGCAG CGCAACGAGC GCATTCGCTT GCGGATCATC
AACGCAGCAA GCGCTCGAAT TTTCCCGCTG AGGCTCTCTG GATTCAGTGG CTGGACGGTG
GCCGTGGATG GAATGCCAAC CGGCCAACCC CAGTCGGTTG ACGGCGAGTT GATCCTCGGC
CCGGCACAGC GCGTCGACTT AATTGTGGAT GTGACCGAAG ACGAAGGCGG CACCGCCCAA
TTGCTTCGCA TCGGCGATGA TGATCAACTG ACCCCGTTGG TGAGTTTTCT GGTCAACGGC
ACAGCCAGTT CAGTACCAAG AGGCAAGCCA CTGCCGTTGC CGCCGAACCC CGCGGCACAC
GCCCCGGACC TTGCCGATGC GCGTGATTTG CGACTGGTCA TGTCCGGCGG GGCAATGGGG
CGAATGCAGT CCGCATTGCT TGGCGGGGAA CGTCTTGGAT TCCGTCAGCT TGCCCAAGCG
GGCAAATTCT GGGCCCTGAA TGATGTCGCC GAAATGACCT ACACGCCACT GGCCGATCTA
TCCCTGAACG AGCCGGTGCG CCTGAAGATC GAGAACCAGA CCGTTTTCCC ACATGCGATG
CACCTGCACG GGATGCATTT CCGCGAGCTG CGCCCCGACG GCGCGTTCGG GCCGATGCGG
GACACGATCC TGTTGGCCGG CAACGAGTCC CGGGAGATCG CCTTTACGGC AGACAATCCC
GGCAAGTGGC TGTTCCATTG CCACATGCTC AGCCACGCCG CATCTGGCAT GACAACCTGG
ATACGGGTCA CATGA
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| Protein sequence | MRQTRRDFLR HATLAACAAA IPQSAFAATP FEDLIAKVAR RQLLPDTYPE TEIWGYDGLV
PAPEIRVTQG DRVRRRFRNE VPDPSSVHWH GIRIDNAMDG VSGLTQEAVA PGGTFDYDFV
VPDAGTYWYH AHNRSYEQVA RGLRGALIVE EVDGPDIDRE EVIVLEDWLL DPESGQLFDN
FEQPMMMSHG GRTGNFITTN GRYDLTLPAQ RNERIRLRII NAASARIFPL RLSGFSGWTV
AVDGMPTGQP QSVDGELILG PAQRVDLIVD VTEDEGGTAQ LLRIGDDDQL TPLVSFLVNG
TASSVPRGKP LPLPPNPAAH APDLADARDL RLVMSGGAMG RMQSALLGGE RLGFRQLAQA
GKFWALNDVA EMTYTPLADL SLNEPVRLKI ENQTVFPHAM HLHGMHFREL RPDGAFGPMR
DTILLAGNES REIAFTADNP GKWLFHCHML SHAASGMTTW IRVT
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