Gene Dshi_3781 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_3781 
Symbol 
ID5714310 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009955 
Strand
Start bp180817 
End bp181377 
Gene Length561 bp 
Protein Length186 aa 
Translation table11 
GC content57% 
IMG OID641276696 
ProductErfK/YbiS/YcfS/YnhG family protein 
Protein accessionYP_001541992 
Protein GI159046320 
COG category[S] Function unknown 
COG ID[COG1376] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.818796 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGACAT CGCGAAACAA CAAGATCAAT CGACGAAGCC TGTTGGGGTA TGCGGCTGTC 
GCTTTGGTTG CACCAAGCGT GGTTCGAGCC GAAACCATTC GCCGCAACAT TTCTTCTTTC
CGAGTTCATG ACTGGCAAGA CCATTTCGAC ACGCTCGGCA AAGGGATCAT CATCTCAGAC
ACCGTGACGA TGGCGCTACA GCACTGGACA GCGGACGGCG AGATGCGGAT TTACCCGACA
TCCGTTCCGC TGACCGACGA ACTCACCAAA CGCGGTTACA CTGAAGTGGT GGAAAAACGC
AAAAACCCCA GTTGGGCGCC GACGCCCTCC ATGCGGGAAC GCAATCCGGA ATGGCCGGCA
CGTATCGAGG GGGGTGATCC GGACAACCCC TTGGGTACTC GCGCACTGTA CCTGTCGTGG
CAGTACTACC GTATTCACGG GACACAGGAC ACGCGCAAGA TCGGCCGCCG GTCGTCAAAC
GGCTGCATCG GTTTGTTCAA CGAACAGATC GAGGAAGTCT ACGAGCGAGC GCCTGTCGGC
ACTCAAGTCA AACTCATCTG A
 
Protein sequence
MTTSRNNKIN RRSLLGYAAV ALVAPSVVRA ETIRRNISSF RVHDWQDHFD TLGKGIIISD 
TVTMALQHWT ADGEMRIYPT SVPLTDELTK RGYTEVVEKR KNPSWAPTPS MRERNPEWPA
RIEGGDPDNP LGTRALYLSW QYYRIHGTQD TRKIGRRSSN GCIGLFNEQI EEVYERAPVG
TQVKLI