Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dshi_3781 |
Symbol | |
ID | 5714310 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dinoroseobacter shibae DFL 12 |
Kingdom | Bacteria |
Replicon accession | NC_009955 |
Strand | + |
Start bp | 180817 |
End bp | 181377 |
Gene Length | 561 bp |
Protein Length | 186 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 641276696 |
Product | ErfK/YbiS/YcfS/YnhG family protein |
Protein accession | YP_001541992 |
Protein GI | 159046320 |
COG category | [S] Function unknown |
COG ID | [COG1376] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.818796 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGACAT CGCGAAACAA CAAGATCAAT CGACGAAGCC TGTTGGGGTA TGCGGCTGTC GCTTTGGTTG CACCAAGCGT GGTTCGAGCC GAAACCATTC GCCGCAACAT TTCTTCTTTC CGAGTTCATG ACTGGCAAGA CCATTTCGAC ACGCTCGGCA AAGGGATCAT CATCTCAGAC ACCGTGACGA TGGCGCTACA GCACTGGACA GCGGACGGCG AGATGCGGAT TTACCCGACA TCCGTTCCGC TGACCGACGA ACTCACCAAA CGCGGTTACA CTGAAGTGGT GGAAAAACGC AAAAACCCCA GTTGGGCGCC GACGCCCTCC ATGCGGGAAC GCAATCCGGA ATGGCCGGCA CGTATCGAGG GGGGTGATCC GGACAACCCC TTGGGTACTC GCGCACTGTA CCTGTCGTGG CAGTACTACC GTATTCACGG GACACAGGAC ACGCGCAAGA TCGGCCGCCG GTCGTCAAAC GGCTGCATCG GTTTGTTCAA CGAACAGATC GAGGAAGTCT ACGAGCGAGC GCCTGTCGGC ACTCAAGTCA AACTCATCTG A
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Protein sequence | MTTSRNNKIN RRSLLGYAAV ALVAPSVVRA ETIRRNISSF RVHDWQDHFD TLGKGIIISD TVTMALQHWT ADGEMRIYPT SVPLTDELTK RGYTEVVEKR KNPSWAPTPS MRERNPEWPA RIEGGDPDNP LGTRALYLSW QYYRIHGTQD TRKIGRRSSN GCIGLFNEQI EEVYERAPVG TQVKLI
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