Gene Dshi_3777 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_3777 
Symbol 
ID5714306 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009955 
Strand
Start bp176296 
End bp176769 
Gene Length474 bp 
Protein Length157 aa 
Translation table11 
GC content58% 
IMG OID641276692 
Productcytochrome C biogenesis protein 
Protein accessionYP_001541988 
Protein GI159046316 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG3088] Uncharacterized protein involved in biosynthesis of c-type cytochromes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGACAGT TGATTTTCGC GTTTTGCATC GGGCTCCTTC CCTTTGCCGC CAATGCGGTG 
GAACCGGACG AAATGCTGAC CGACCCGGTA TTGGAACAGC GTGCGCGGGA GATTTCCAAG
GATCTACGAT GCGTCGTCTG TCAGAACCAG GACATCGACA GTTCGAACGC GGGTGTGGCG
CGGGACTTGC GTCTGCTCGT ACGCGAGCGC CTGGTCGTTG GAGACAGCGA CGCGGAGGTG
ATCGAATACA TACGGGCGCG GTACGGGGAT TACGTGCTGC TGAAACCGCC TCTGGAGCCT
GCGACCTACG CGCTTTGGTT CGCTCCGATC GCTTTCGTTC TGATCGGGGT TTTCGTTGGT
GGCGGGCTAC TGATGAGTCG GCGAAAGCAA GAGGCATTTG AAGACTTGGG CTCGGAGGAT
GAGAACACCG TGTCCGAAAT TCTCAGGCAA AACGAAGCGG GGGATGCGTC ATGA
 
Protein sequence
MRQLIFAFCI GLLPFAANAV EPDEMLTDPV LEQRAREISK DLRCVVCQNQ DIDSSNAGVA 
RDLRLLVRER LVVGDSDAEV IEYIRARYGD YVLLKPPLEP ATYALWFAPI AFVLIGVFVG
GGLLMSRRKQ EAFEDLGSED ENTVSEILRQ NEAGDAS