Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dshi_3773 |
Symbol | |
ID | 5714302 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dinoroseobacter shibae DFL 12 |
Kingdom | Bacteria |
Replicon accession | NC_009955 |
Strand | + |
Start bp | 171951 |
End bp | 173417 |
Gene Length | 1467 bp |
Protein Length | 488 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 641276688 |
Product | integral membrane sensor signal transduction histidine kinase |
Protein accession | YP_001541984 |
Protein GI | 159046312 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.996229 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCCGTG CGATGAGATC TCTGAGCGGC CAATTGATCC TGCTTGTGGT CGCGGCACTT GTCGTGGCCC AGGTGATCAG CCTGTTCCTG TTCGCCGACG AGCGCAGCCT TGCGATCCGT GCAGCTTTAG GATTCGAGGC CGCGGGTCGC GCAGCGAATG TCGCGCGGTT GATCGAAGAG GCCCCGCTGG ATCTGCAGGA CTCGATCCTT CGCGCGGCAA ATTCGCCTCT GATCCGGTTC GATCTGTCGG ACGCTCCGAT CGTGGATCAC ACCGGTCATT CGGACGGCGG CATCGTGGAA GCGCGCATAC GCGCCCTGAT GGATGACAGC TACAGCCGGG ATATTCGCGT TGAATTGCAC GAGGTCGAGG GCGAGTTGCG GCCTCTTCCC AATCTCTCGG ACGAGATGAC AGAAATGCAT CTCGCGATGA TGCGCGGAGA GTTGACAGCG GTTGAAATGA ACCTGTCCAT CGCCATCAAG GGAGCGCGTT GGCTGAATGT CGGAACGCGG TTCGAGCGAC CGCCGATCCA ATGGCCTTTC TATTCGATGC TGACCTTCGG GATTTCCGCC GGACTGCTTC TGGTGGCGAT CTTCTGGTTT GTAATGACGC GCCTGACGCG TCCTTTGCGG CACCTGTCGA AGGCCGCGGA CCATCTTGGC CGGGGCGAAG ATGTGGGCGA ATTGGCGGTC ACAGGGCCGA CCGAGGTCAG AGATCTGACC GTCGCATTCA ACCGCATGCA ACGACGGCTG ACCCGGTTTG TCAGTGATCG TACACGTATG CTCGCAGCCC TTGGCCACGA TTTACGCTCG CCGTTGACTG CCATGCGTGT CCGCGCGGAG CTGGTTGACG AAGAAGAGAC GCGGGACAGC CTCATCGCAT CGGTCGAAGA GATGCAGAGT ATGGTCGAAG CGACGCTCAC CTTTGCACGC GGCCTTACCG GATCCGAAGG TGCCGAAGTG GTCGATCTGC GCAATTTTCT GGACAGCTTG TGCAGCGATA TGGCGGCACA CTGCACCTTT GCCCCGAGTG ATGATGTTGC CGTGCGGCTT CGACCCAACG CGTTCCGAAG GGCACTGAGG AACTTGCTTG AGAACGCCGT TCGCTACGGT GGTGCCGCAA AAGTCAGCTG GGCGACCCAC GGTTCGAACC TCGTACTCAA CATCGATGAC AATGGGCCCG GCATTCCCGT CGACCAGTTG GAAAAGGTCT TCGATCCGTT CTATCGCCTC GAGCAATCGA GGTCTCTGGA AACGGGCGGT TATGGGCTTG GGCTCTCAAT CGCGAGGACA ATCGTCCAAT CCCATGGCGG CGATATCCAG CTGGTCAATC AGAACAGCGC GGGTTTGCGC GCTGTTGTCA CCATCCCGTT GGATGAAACC GAACTGATCG AAGGAGAAAC AGATGAAACT GAACGCGTTG ATCCTGCCGT TGCTGGCCAG CTTGCCCGCC AGCATGGCGC AGGCTGA
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Protein sequence | MRRAMRSLSG QLILLVVAAL VVAQVISLFL FADERSLAIR AALGFEAAGR AANVARLIEE APLDLQDSIL RAANSPLIRF DLSDAPIVDH TGHSDGGIVE ARIRALMDDS YSRDIRVELH EVEGELRPLP NLSDEMTEMH LAMMRGELTA VEMNLSIAIK GARWLNVGTR FERPPIQWPF YSMLTFGISA GLLLVAIFWF VMTRLTRPLR HLSKAADHLG RGEDVGELAV TGPTEVRDLT VAFNRMQRRL TRFVSDRTRM LAALGHDLRS PLTAMRVRAE LVDEEETRDS LIASVEEMQS MVEATLTFAR GLTGSEGAEV VDLRNFLDSL CSDMAAHCTF APSDDVAVRL RPNAFRRALR NLLENAVRYG GAAKVSWATH GSNLVLNIDD NGPGIPVDQL EKVFDPFYRL EQSRSLETGG YGLGLSIART IVQSHGGDIQ LVNQNSAGLR AVVTIPLDET ELIEGETDET ERVDPAVAGQ LARQHGAG
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