Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dshi_3766 |
Symbol | |
ID | 5714295 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dinoroseobacter shibae DFL 12 |
Kingdom | Bacteria |
Replicon accession | NC_009955 |
Strand | - |
Start bp | 166777 |
End bp | 167769 |
Gene Length | 993 bp |
Protein Length | 330 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 641276681 |
Product | fatty acid hydroxylase |
Protein accession | YP_001541977 |
Protein GI | 159046305 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG3000] Sterol desaturase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.288136 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.422159 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACATAA TACTAGCCGC AGAGCCGGAG ATTCGTCTGA CGGCGTTTTT GAGTGTGCTG GCCGCCATGG CGCTTTGGGA ACTCGCCGCC CCGCGTCGGC GGCGTGACAT TCCGCGTGTC ATCCGTTGGT CGAACAACCT GGCACTTGTC GTGATCGATA CGGCGATCCT CCGGTTGTCT TTCCCAATCC TGGCCGTCGG TCTGGCGGTC CTGGCCGAGG AGCGGGGCTG GGGCCTGTTC AACATTATCG AGGCTCCTTT CGGGTTGGCT GTGATCCTGT CCATGCTGCT GCTCGATCTG GCGATCTATC TGCAACATGT CATGTTCCAC GCCGTCCCGG CCCTGTGGCG CCTGCACCGG ATGCACCATG CGGATCTCGA CTTCGACGCA ACCACTGGAT TACGCTTCCA TCCGATTGAG ATCCTCATCT CGATGGCGAT CAAGCTCGCC CTGGTGGCAG CGCTTGGTCC GCCCGGCGTC GCGGTTTTGT TGTTCGAGAT CATCCTCAAC GCCACTGCCC TCTTCAACCA TGCCAACATC AACCTGCCGA GACCGGTCGA CCGGTGGCTC AGATGGATCG TCGTCACACC CGACATGCAC CGCGTGCATC ATTCTGTCGA TCCGCGCGAA ACCAACTCAA ACTACGGCTT CAACCTGCCG TGGTGGGACC GCCTCATGGG TACTTACGTA GCCCAGCCCG CGAAGGGCCA CGAGGGAATG ACGATCGGTA TCGAGCAGTT TCGCACGACG CGCGACCTCT GGGTCGACAG GATGTTGATC CAGCCCCTTC GCGGGCCAGC AAGCGGACAC GCCCTGGATA CATCCGCCCT CACGCCGACA AGCAGGAACA GCCTCTGGAC TCTCGAAAAC ACAGTTCTAG GGTCTCGGGT AACTCAAAAA GGAACACATG ATGAAACGAC GTACGTTCTT GCTGGCCGGA GCGGCTGCCA CACTCCCCCT GCGAGCACTG GCCAACACGG AACCGGTCAT TAA
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Protein sequence | MDIILAAEPE IRLTAFLSVL AAMALWELAA PRRRRDIPRV IRWSNNLALV VIDTAILRLS FPILAVGLAV LAEERGWGLF NIIEAPFGLA VILSMLLLDL AIYLQHVMFH AVPALWRLHR MHHADLDFDA TTGLRFHPIE ILISMAIKLA LVAALGPPGV AVLLFEIILN ATALFNHANI NLPRPVDRWL RWIVVTPDMH RVHHSVDPRE TNSNYGFNLP WWDRLMGTYV AQPAKGHEGM TIGIEQFRTT RDLWVDRMLI QPLRGPASGH ALDTSALTPT SRNSLWTLEN TVLGSRVTQK GTHDETTYVL AGRSGCHTPP ASTGQHGTGH
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