Gene Dshi_3765 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_3765 
Symbol 
ID5714294 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009955 
Strand
Start bp166410 
End bp166862 
Gene Length453 bp 
Protein Length150 aa 
Translation table11 
GC content63% 
IMG OID641276680 
Producthypothetical protein 
Protein accessionYP_001541976 
Protein GI159046304 
COG category[R] General function prediction only 
COG ID[COG3019] Predicted metal-binding protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.154858 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.256007 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGAAAC GACGTACGTT CTTGCTGGCC GGAGCGGCTG CCACACTCCC CCTGCGAGCA 
CTGGCCAACA CGGAACCGGT CATTAAAGTC CTGAAAACCC CCACCTGCGG ATGCTGCACC
GCTTGGGTCG ATCATGTCCG GCAAGCGGGC TTCGCGGTCG AGGCGCAGGA CGTCGATCAG
GATGCGCTTT ATGCGTTCAA AGATCGGCTG CAAATTGCAC CGGAACTTGC TGGATGTCAC
ACGGCGGTCG TGGGCGACTA TTTTATCGAG GGCCACGTGC CTGCCGCGGA CATCACGCGG
CTGCTAGCAG AGCAACCGAT GGCGCGCGGT TTGACTGTCC CCCGCATGCC GATGAGTTCG
CCCGGCATGG GCGGTCCCGG GGCCGGTGAC GCTTTTGACA CCTTGCTTGT TGGCTCCGAC
GGCGCGACCT CGGTCTTCGC GAGCCACAGC TGA
 
Protein sequence
MMKRRTFLLA GAAATLPLRA LANTEPVIKV LKTPTCGCCT AWVDHVRQAG FAVEAQDVDQ 
DALYAFKDRL QIAPELAGCH TAVVGDYFIE GHVPAADITR LLAEQPMARG LTVPRMPMSS
PGMGGPGAGD AFDTLLVGSD GATSVFASHS