Gene Dshi_3754 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_3754 
Symbol 
ID5714283 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009955 
Strand
Start bp159373 
End bp159636 
Gene Length264 bp 
Protein Length87 aa 
Translation table11 
GC content57% 
IMG OID641276669 
ProductWGR domain-containing protein 
Protein accessionYP_001541965 
Protein GI159046293 
COG category[S] Function unknown 
COG ID[COG3831] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.139809 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.744081 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAAGCG GCGCATACGA CCCTGTCGAT CTCGAACGCA TCGATCCGGC CCGGAACATG 
GCGCGGTTCT ATCGGTTGTC TGTGCAGCCC ACCTTGTTCG GGGAACAATC GGTCATCCGG
AGTTGGGGAC GCATCGGGAC ACAGGGCCGC AGCATGATGG TCACTTATGC ATCGGAAGGC
GACGCTGTCA AAGCCTGCAA GAAGCTTTTG TGCAGCAAGG TGGCAAGGGG GTATCTTTGC
CTGAACGATG TCGAGAAATC GTGA
 
Protein sequence
MQSGAYDPVD LERIDPARNM ARFYRLSVQP TLFGEQSVIR SWGRIGTQGR SMMVTYASEG 
DAVKACKKLL CSKVARGYLC LNDVEKS