| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_3751 |
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| Symbol | |
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| ID | 5714280 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009955 |
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| Strand | - |
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| Start bp | 156596 |
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| End bp | 157705 |
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| Gene Length | 1110 bp |
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| Protein Length | 369 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641276666 |
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| Product | integrase family protein |
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| Protein accession | YP_001541962 |
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| Protein GI | 159046290 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.542126 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCAGCA GCATGGCAAA AAATAGCGGG AAATCGAGTG CAAACGCACC AATCGGGTCC
TCCGGCAGTG AGGGCAACAA GAGCAATACG CCGCCCAGCG AGGCCCTGAG CCTTCCCTCC
TTTGTAGCGG GCTCCGGCAG CCTTGACAGG CTGGTCGAGA CGGCACGCGA TTACGCCCGT
GCCGCCGCCT CCGAGAACAC GCTCAAAGCC TATGCGAAAG ACTGGGCGCA TTTTACACGC
TGGTGCCGGA TGAAGGGCGC GGAGGCCCTG CCGCCGTCGC CCGAATTGAT CGGGCTCTAT
CTTGCCGATC TGGCATCGGC TACTGGTGCC TCCCCTGCCC TCTCCGTCTC ATCCATCGAG
CGACGTCTGT CTGGCATGGC GTGGAACTTT GCACAGCGCG GCTCTACGCT TGATCGCAAG
AACCGTCACA TCGCTACGGT ACTGGCAGGC ATCAAGCGCA AACATGCGCG CCCGCCGGTC
CAGAAAGAGG CGATCCTGGC CGAGGACATT CTCGCCATGG TCGCCACCCT GTCCTTCGAC
CTGCGCGGGT TACGTGACCG GGCGATCCTG CTGATAGGTT TTGCCGGAGG CTTGCGCCGC
TCTGAAATCG TCAGTCTCGA TCACGGCAAG GATGATACGC CCGATAGCGG CGGCTGGGTC
AATATCCTTG AGGCCGGCGC CATCCTGACG CTGCGCGGCA AGACCGGTTG GCGCGAGGTC
GAGATTGCTC GCGGCTCCAA AGATCGGACC TGCCCGGTGC ACGCATTGGA GCAGTGGCTG
CACTTTGCAA GGATCGACTT TGGCCCAGTC TTTGTGGGCA CCTCGCGGGA TGGCAAACGG
GCGCTGGAAG CACGGCTAAA CGACAAACAC GTCGCCCGGC TGATCAAGCG TACCATCCGC
GACGCTGGCA TTCGATCAGA GCTGCCCGAA AAGGACCGAC TGGCGCTGTT TTCGGGTCAC
AGTCTGCGAG CCGGTCTGGC CAGTTCTGCC GAGGTCGACG AACGTTACGT TCAGAAGCAG
CTTGGCCATG CCTCAGCCGA AATGACCCGC CGCTATCAGC GCCGCAGGGA CCGGTTCCGG
GTGAACCTGA CCAAGGCTGC GGGATTGTGA
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| Protein sequence | MLSSMAKNSG KSSANAPIGS SGSEGNKSNT PPSEALSLPS FVAGSGSLDR LVETARDYAR
AAASENTLKA YAKDWAHFTR WCRMKGAEAL PPSPELIGLY LADLASATGA SPALSVSSIE
RRLSGMAWNF AQRGSTLDRK NRHIATVLAG IKRKHARPPV QKEAILAEDI LAMVATLSFD
LRGLRDRAIL LIGFAGGLRR SEIVSLDHGK DDTPDSGGWV NILEAGAILT LRGKTGWREV
EIARGSKDRT CPVHALEQWL HFARIDFGPV FVGTSRDGKR ALEARLNDKH VARLIKRTIR
DAGIRSELPE KDRLALFSGH SLRAGLASSA EVDERYVQKQ LGHASAEMTR RYQRRRDRFR
VNLTKAAGL
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