| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_3748 |
|---|
| Symbol | |
|---|
| ID | 5714277 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dinoroseobacter shibae DFL 12 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009955 |
|---|
| Strand | - |
|---|
| Start bp | 155050 |
|---|
| End bp | 155931 |
|---|
| Gene Length | 882 bp |
|---|
| Protein Length | 293 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 641276663 |
|---|
| Product | resolvase domain-containing protein |
|---|
| Protein accession | YP_001541959 |
|---|
| Protein GI | 159046287 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG1961] Site-specific recombinases, DNA invertase Pin homologs |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.57685 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 0.861996 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCGTTGA TAGGCTATGC GCGAGTATCG ACCGAGGATC AGACCCCCCT GCCCCAGTCG
CAGGCGCTGA AATCAGCGGG CTGTGTCGAA ATCCATGAGG AACAGGCTTC TGGCGGTGAT
CGTGCGCGGC CTGTGCTGGC GCGGGTGCTG GAACGGATCG GCAAGGGCGA TACGCTGGTG
GTGGTGCGCA TCGACCGGCT GGCGCGGTCG CTGTCGCATT TGCTGGAGGT GATCGAACGG
CTGGAAGCAA AGGGCGCCTT CTTCCGCTCG ATTCAGGACC CGATCGACAC CGGATCCCCG
CAGGGCAAGT TCACGCTGCA GGTTCTGGGT GCAGCAGCCG AGTTCGAGCG CGCCCTGATC
CGTGAACGGA CCAAGGCTGG GCTTGCCAGC GCACGAACAA AGGGGCGGGT CGGCGGAAAC
CCTGGCCTGC GCGCCCGGGA TCCGGCTGCG CTACGCAAGG TCCGACTGGC GCGACAGGAC
GGATATATGG AACGCCTGAA TGAAACTGCG CAGGACTGGG TGCCCCATGT GCGTCGGCTG
CGCCCCGATC TGGCTTGGGA AGATGTGGTG CGCATCATCA ACGGCCCCCT ACCCGAGGCC
CGGCGCTGGA CGCAAAGCCG TCTGCTGCGC GCTGTGAACG CCTACGTCCG CGATGGGTTC
CTCCCCGCGA CCGTGCTTGA TCGCGCGGGC CCGCGTGCGC GAGATGATCG CCTGCCCGCC
ATCGTCGCGG GTATCAAGGG CGCCGATCCC GACATTACGC TTCAGGCCAT CTGCGCCCGC
TTGGAGAACA TGCGTGAGCG CACACCCCGC GGCCGGACAA GCTGGCAGCC ATCATCAGTG
AAGATGTTGC TGGAGCGGGC GAAGCGGCTT GGGATACTAT GA
|
|---|
| Protein sequence | MPLIGYARVS TEDQTPLPQS QALKSAGCVE IHEEQASGGD RARPVLARVL ERIGKGDTLV
VVRIDRLARS LSHLLEVIER LEAKGAFFRS IQDPIDTGSP QGKFTLQVLG AAAEFERALI
RERTKAGLAS ARTKGRVGGN PGLRARDPAA LRKVRLARQD GYMERLNETA QDWVPHVRRL
RPDLAWEDVV RIINGPLPEA RRWTQSRLLR AVNAYVRDGF LPATVLDRAG PRARDDRLPA
IVAGIKGADP DITLQAICAR LENMRERTPR GRTSWQPSSV KMLLERAKRL GIL
|
|---|
| |