Gene Dshi_3736 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_3736 
Symbol 
ID5714265 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009955 
Strand
Start bp142349 
End bp143254 
Gene Length906 bp 
Protein Length301 aa 
Translation table11 
GC content58% 
IMG OID641276651 
Productintegrase catalytic region 
Protein accessionYP_001541947 
Protein GI159046275 
COG category[L] Replication, recombination and repair 
COG ID[COG2801] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGCCT TCATTGAGGA TCAGCGCGTT GTTTACGGTG TCGAGTCGAT CTGCAGGGTG 
CTGCCGATCG CGCCGTCAAC ATTCTATCAC CACCTGGCGT GCCTCGCTGA TCCGTCCAAA
GCTTCGGCCC GGCATCAGCG GGATACGGAG CTGCGCCCGG AGATCAAACG TGTCTGGGAT
GAGAATTATC AGGTCTACGG GGTCCGTAAG GCATGGCATC AGCTGAAGCG CGAGGGCTTT
GAGCTGGCGC GCTGCACGGT GGAGCGGCTG ATGAAACATA TCGGCATCCG TGGGGCTGTG
CGCGGCAAGG TGGTCAAAAC AACCGTCCCT GACACGTCAG CGCCTTGTCC GCGTGACAAG
GTGAACCGCG TGTTCCGGGC ACCAGCCCCG AACCTCCTCT GGGTCAGCGA TTTTACCTAC
GTGTCGACAT GGCAGGGCTT TGTCTATGTT GCCTTCGTCA TCGACACGTT TGCAGATCGC
ATCGTCGGCT GGCGGGTCTC ACGGTCGGCC AAAACAGACT TTGTTCTCGA TGCTCTTGAA
CAGGCCCTGC ATGATCGACG GCCGGTCCAA AAGAGCGGCT TGGTCCACCA CTCGGATCGT
GGCGGGCAAT ATTTATCCAT TCGCTATACC GAGCGTCTGG CCGAAGCTGG CATCGAGCCA
TCGGTCGGCA GCGTCGGGGA TTCCTATGAC AACGCCCTCG CAGAAACGAT CAATGGTCTA
TACAAAACCG AGCTGGTCCA TCGTCAAGGA CCGTGGCGCA ATATGCAGGA TCTGGAAATG
GCGACACTCG GCTGGGTCGA TTGGTTCAAC AACCGGCGCC TGCTTGGACC CATCGGAAAC
ATCCCGCCAG CAGAGGCTGA AGACAACTTC TATGCATACC GCGAAGTGCT CGATATGGTC
GCGTGA
 
Protein sequence
MIAFIEDQRV VYGVESICRV LPIAPSTFYH HLACLADPSK ASARHQRDTE LRPEIKRVWD 
ENYQVYGVRK AWHQLKREGF ELARCTVERL MKHIGIRGAV RGKVVKTTVP DTSAPCPRDK
VNRVFRAPAP NLLWVSDFTY VSTWQGFVYV AFVIDTFADR IVGWRVSRSA KTDFVLDALE
QALHDRRPVQ KSGLVHHSDR GGQYLSIRYT ERLAEAGIEP SVGSVGDSYD NALAETINGL
YKTELVHRQG PWRNMQDLEM ATLGWVDWFN NRRLLGPIGN IPPAEAEDNF YAYREVLDMV
A