| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_3734 |
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| Symbol | |
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| ID | 5714263 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009955 |
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| Strand | + |
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| Start bp | 141254 |
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| End bp | 142120 |
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| Gene Length | 867 bp |
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| Protein Length | 288 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 641276650 |
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| Product | transposase IS116/IS110/IS902 family protein |
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| Protein accession | YP_001541946 |
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| Protein GI | 159046274 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG3547] Transposase and inactivated derivatives |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGACGC CATCTACTGC GGCGACCTGC TTTGTCGCCA TTGATCTGAG CAAATCGAAA
TGGCTTGTGG CGCTTGATGC GCCGCAATTG GCCAAGATCA AATCCGTGCG TTTGGACGGG
TTTGATACGG CAGGACTGAT TGATCTGGTT CGAGCAACCG TTGCGGAGGC GACTGAGCTT
TGCGGGCCTG ATCAGCGGCC GATCGTTTGC TTCGAAACTG GATACGATGG TTTCTGGCTG
CAGAGGCTGC TGGCCAATGA AGGGATCGAG ACCTTGGTTG TGGATCCGAC CAGCTTTCTG
GTGAACCGCA AAGCGCGCCG GGTCAAAACG GATCGCGTCG ACGCCGAAGG CATGGTCGTT
CTGCTGAAGA ACTACTGTTC CGGAGATCGA AAGGCATTCC GCACTGTGCG CGTCCCGACC
GTTGCTGAAG AAGACGCCAA ACGCTTCCAC CGAGAGCGCA AGAGGCTAAT GAGCGAACGA
ACTGGCCACA TCAATCGCAT TCGTGCCCTT CTCGCCCTGC AAGGCGTCCG GCATATCAAC
CCAGCGATGG TCACATGGCG CAAGAAACTG GAGGGCCTCG AAACTGCCGA TGGCCGCCCT
TTCCCCGATC AGCTCATGCG CGAGATCGTG CGATCTTTCG AACGCTTGGA ACTGACGAAC
AAGATGATCA AGGCTCTGGC CGAGGAACGC GACGAAGCTC TTGCAGCTGA ATCTGGACAG
TTCCCCGAGC ACGAAAAGGC AGTGCTGCTC GAAGGGCTTC GCGGTGTTGG ACGACACAGT
GTGGACCTGT CACGGTTTGA TGCCGCTCCT TTGATAGCAT TTACTGCAAC AAAGGAGACG
AACTATGGGC ACAGGAAGAA CGGATGA
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| Protein sequence | MMTPSTAATC FVAIDLSKSK WLVALDAPQL AKIKSVRLDG FDTAGLIDLV RATVAEATEL
CGPDQRPIVC FETGYDGFWL QRLLANEGIE TLVVDPTSFL VNRKARRVKT DRVDAEGMVV
LLKNYCSGDR KAFRTVRVPT VAEEDAKRFH RERKRLMSER TGHINRIRAL LALQGVRHIN
PAMVTWRKKL EGLETADGRP FPDQLMREIV RSFERLELTN KMIKALAEER DEALAAESGQ
FPEHEKAVLL EGLRGVGRHS VDLSRFDAAP LIAFTATKET NYGHRKNG
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