| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_3720 |
|---|
| Symbol | |
|---|
| ID | 5714249 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dinoroseobacter shibae DFL 12 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009955 |
|---|
| Strand | + |
|---|
| Start bp | 127602 |
|---|
| End bp | 128429 |
|---|
| Gene Length | 828 bp |
|---|
| Protein Length | 275 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 641276636 |
|---|
| Product | molybdopterin dehydrogenase FAD-binding |
|---|
| Protein accession | YP_001541932 |
|---|
| Protein GI | 159046260 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1319] Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM homologs |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.57476 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAACCCG CCGCATTCGA TTATGTCCGC TGCGAAACGC TCGATGAGGC CGCCGAGATG
ATCGCCCAGA CCGGCGATGA CGCCCGCATC CTTGCTGGGG GTCAGTCGCT GGTGGCGATG
CTGAACATGC GGCTTGCCAC GCCGGCGGTC CTGGTCGACG TCATGCCGGC CCCGGACGCG
CGGAAAGTCG CGGCGGAAAA TGGCACGCTG AAAATCTCTG CCGCTGTCCG GCAGGCGAGC
CTGTTGGGCG ATCCCGACCT GGCCTCGCGC AACCCGCTGC TTGCGAAAAT GCTGCCGTGG
GTCGGCCACC CCCAGACCCG TGCGCGCGGC ACCATCTGCG GCTCGGTGGC CCATGCCGAT
CCTTCCGCCG AGATTCCGCT GGCGCTGGCC GCGCTGGACG GCACGGTGAT CCTGCGGCGC
GGGCGCAAGC GGCGCAGCGT GAAGGCGGCC GACTTTTTCC TCGGTATGAT GCTGACCGAC
AAGGCCGATG ACGAAATGAT CGAGGCGGTG ACTTTTGCCG ATGTCCAGCA AGGCACCGGC
ACGGGATTTG CCGAGGTCGG CCGCCGCAAG GGAGATTTCG CCATCGTCGC CTGCGCCGCG
TTGATTTCGC CCAAGCGCGT CCGCCTTGCC GTCGGCGGCG TGAACGACAC GCCGTTTGTC
AGGGACTGGG ACAACCTCTC ACCCCAGGAC GAAGCCGAGG CGCTCAACGC GCTCGCCTGG
TCGCTCGATG CGCGGGGCGA CCTGCATGCA ACCGCCCGCT ATCGCCGCGA TCTGGTGCGC
CATCTGGGCG CGCAGGCACT CAAGGAGGCC CGCACATGCG CCGATTGA
|
|---|
| Protein sequence | MKPAAFDYVR CETLDEAAEM IAQTGDDARI LAGGQSLVAM LNMRLATPAV LVDVMPAPDA
RKVAAENGTL KISAAVRQAS LLGDPDLASR NPLLAKMLPW VGHPQTRARG TICGSVAHAD
PSAEIPLALA ALDGTVILRR GRKRRSVKAA DFFLGMMLTD KADDEMIEAV TFADVQQGTG
TGFAEVGRRK GDFAIVACAA LISPKRVRLA VGGVNDTPFV RDWDNLSPQD EAEALNALAW
SLDARGDLHA TARYRRDLVR HLGAQALKEA RTCAD
|
|---|
| |