| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_3718 |
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| Symbol | |
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| ID | 5714247 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009955 |
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| Strand | + |
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| Start bp | 123637 |
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| End bp | 124554 |
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| Gene Length | 918 bp |
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| Protein Length | 305 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 641276634 |
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| Product | AraC family transcriptional regulator |
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| Protein accession | YP_001541930 |
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| Protein GI | 159046258 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTGGCTAG AACGTAAAGC GAGAAAGCGA GGAGCGCGTT ACCGCCGCCT GATGTCCAAC
GCCCTGAGGA TCAGAACCGG AAAATTCGGC CGTGTCGCGC TGCTCGACAT GGATCGTCCG
CTTGTGCGTC ACGCCCACCC GCATTGCCAT GTCCTGCTCA AGGTCGAGGG TGCCGATACG
AGTTTTCTCG TCGGTGACGA GGTTGTGCCG CTGACCCACG AAAGCGCGGT TCTGATCAAC
GCATGGACGC CGCATGCCTA TGTGCATCGG CCCAATGCCC CGCGCACGAT CATCCTTGCC
CTCTATATCG AGCCTTCTTG GCTGGCTGAG TTTCGTTCCA ACTGGGTCGC CAGCGCCGGG
TCCGGGTTCT TTGACAGAAC CGTCGATGCG ATCACGCCGC AGATCCGCAA GCAGGCCATG
ACACTTGCCG CGAGCATGGT ACATGCCCCG ACCGCCATCG CCGATCATGA GACGCAGCTG
GGCGAATTGA TGGTGTCGGT GATCGAACGG TTTACCGAAT GGCGGTCAGT CGGGCCAAGC
CTGCGCGACG CGGCGCAAAG CCAGGCCATC GACTGGCGCG TGTCCAAGGC GATCAGCAAG
CTGCACAAGG TTGCCGGAGA GGTGTCGGAC ATCGACAGCC TCGCGCAGAC CGTTGGCATG
AGCCGCGCGA ATTTCTTCCG GGTTTTCGAA CGCTCGACCG GCGTGACGCC ACGGGTGTTT
TCCAACATGA TCCGGCTGGA GCGGGCGGTG AGCGCCGTCG TTTCGTCGGA CCTCAGCTTC
GGTGCGCTGT CCGATCAGCT GGGATTTACC GCGCAGGCGC ATTTCACCCG ATTCTTCCGC
GATCATACAG GCGTGCCGCC CAGCAGCTTC CGGTCGATCT CGCGGCTTGG GGATACCTCT
GATTTTTTCC GTATTTGA
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| Protein sequence | MWLERKARKR GARYRRLMSN ALRIRTGKFG RVALLDMDRP LVRHAHPHCH VLLKVEGADT
SFLVGDEVVP LTHESAVLIN AWTPHAYVHR PNAPRTIILA LYIEPSWLAE FRSNWVASAG
SGFFDRTVDA ITPQIRKQAM TLAASMVHAP TAIADHETQL GELMVSVIER FTEWRSVGPS
LRDAAQSQAI DWRVSKAISK LHKVAGEVSD IDSLAQTVGM SRANFFRVFE RSTGVTPRVF
SNMIRLERAV SAVVSSDLSF GALSDQLGFT AQAHFTRFFR DHTGVPPSSF RSISRLGDTS
DFFRI
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