| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_3710 |
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| Symbol | |
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| ID | 5714239 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009955 |
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| Strand | - |
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| Start bp | 115872 |
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| End bp | 116441 |
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| Gene Length | 570 bp |
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| Protein Length | 189 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641276626 |
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| Product | tripartite ATP-independent periplasmic transporter DctQ |
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| Protein accession | YP_001541922 |
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| Protein GI | 159046250 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3090] TRAP-type C4-dicarboxylate transport system, small permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.74701 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAATAC TGCGTAAATT GAGTACCGGC ATCGCCCGGA TCGAAGTGTT GATCGGCGCC
GCGCTCGGTG CGGTCACGAC GGCGCTGATC CTGCTCAACG TTGTCACCCG CAGCTTTGCC
AAGGCGCTGT TCTGGGTAGA CGAGGCGGCG ATAACCTCGA TGGTTTGGAT GACCTTCCTC
GGCGCTTCGG CGGCAATCCA CCATCGCCAG AGCGTCGCCG TCACCTTTGT GCCGGACATG
CTGCGCGGCC CTGTGGCGCG CGCACTCCTG ATCGCAACGG ATCTGGCCGT GCTGGTGTTC
TTTTGCGTCC TGTTCGCCTT GGCCTGGAAC TGGTTCGATC CCATCACGCT GGCCCGGCAT
GGCTTCGATA CCGGCGCGTT TTCCGGTGCG ACCTTCAATT TCATCTACTC CGAGGTCAGC
ACCACGCTGG GCGTGCCGAA ATTCTGGCTC TGGCTGATCG TACCGATTTT TGCCTTCGGC
GCGTCCGTTC ATGCGCTGAA CAACCTGGCT CAGACCGCTT ACGGCGGCCC CGAAACCGGC
CCGCTGGGGT CCGATAGGGA GGTCGCGTAA
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| Protein sequence | MEILRKLSTG IARIEVLIGA ALGAVTTALI LLNVVTRSFA KALFWVDEAA ITSMVWMTFL
GASAAIHHRQ SVAVTFVPDM LRGPVARALL IATDLAVLVF FCVLFALAWN WFDPITLARH
GFDTGAFSGA TFNFIYSEVS TTLGVPKFWL WLIVPIFAFG ASVHALNNLA QTAYGGPETG
PLGSDREVA
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