| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_3708 |
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| Symbol | |
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| ID | 5714237 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009955 |
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| Strand | + |
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| Start bp | 113772 |
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| End bp | 114608 |
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| Gene Length | 837 bp |
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| Protein Length | 278 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641276624 |
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| Product | AraC family transcriptional regulator |
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| Protein accession | YP_001541920 |
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| Protein GI | 159046248 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCATT CGATGGACCT GACAGAGGGC GCCGAGATCT TGGCCGGGCG TTTTGGCCGG
GCGGCGCTGT TGTCGCTCAA GGATCGGCTG ACCGCCCATG CCCATGCGCA GACCCATCTG
ATCATCAAAC TCGGTGGCCC CGACCAGGTT TTTGTCGTCG ATGGCCAGAC CGTTCCGCTG
ACAGCGGACC GCGCCGTGGT GGTCAACCCG TGGCAAGAGC ATCACTATAC GCCGACTGAC
ACGGCTGCGA TATCGTCCTA TCTCGCGCTG TACATCAATC CCGGCTGGCT GCGCCGGGCC
AGCGACCTGT TCGATGGCTG CGGCCTGCCG GGTTTCTTTG AACGCCCGTC GATCCGGGTT
GACGAACGCG CGCAAGGGTT GGCGCGTGAA TTGCGTGATC TTATCCACGC ACTGGAGGGC
CGCAACGAAC GGGCCGAGGA CGTGATCGTG GCGCTGATGA CCCATTTCGT GCGGGCCGAA
AATGCCGGGC GCAAGGCCGC GCAGGGTTTT GTCGATTTCC GAATACGGCG GGCGGTCGAG
CAGATGCAGG ACAATCCTGA CCAACAATAC GATCTGGACG CATTGGCCCG TAGCGTCGGT
CTGTCACGAT CGCGCTTCAA CGTATTGTTC AAGGATACCG TCGGCGTCGG GCCGGGCATC
TATGGAAACG CGATCAGGAT CGAGGCCGCG GTATCGGCAT TGGCCGACCG GGCCAGCGCG
CAGGATGTCG CGGCCGATCT CGGCTTCAGT TCGCCGGGGA ATTTCAATCG GTTCTTCCGG
TATCACACCG GCGTGTCGCC GGCAAAATTC AAACGGTCCC TGCACGACAT CGGCTGA
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| Protein sequence | MKHSMDLTEG AEILAGRFGR AALLSLKDRL TAHAHAQTHL IIKLGGPDQV FVVDGQTVPL
TADRAVVVNP WQEHHYTPTD TAAISSYLAL YINPGWLRRA SDLFDGCGLP GFFERPSIRV
DERAQGLARE LRDLIHALEG RNERAEDVIV ALMTHFVRAE NAGRKAAQGF VDFRIRRAVE
QMQDNPDQQY DLDALARSVG LSRSRFNVLF KDTVGVGPGI YGNAIRIEAA VSALADRASA
QDVAADLGFS SPGNFNRFFR YHTGVSPAKF KRSLHDIG
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