| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_3705 |
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| Symbol | |
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| ID | 5714234 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009955 |
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| Strand | - |
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| Start bp | 112171 |
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| End bp | 113076 |
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| Gene Length | 906 bp |
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| Protein Length | 301 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 641276621 |
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| Product | integrase catalytic region |
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| Protein accession | YP_001541917 |
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| Protein GI | 159046245 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG2801] Transposase and inactivated derivatives |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCGCCT TCATTGAGGA TCAGCGCGTT GTTTACGGTG TCGAGTCGAT CTGCAGGGTG
CTGCCGATCG CGCCGTCAAC ATTCTATCAC CACCTGGCGT GCCTCGCTGA TCCGTCCAAA
GCTTCGGCCC GGCATCAGCG GGATACGGAG CTGCGCCCGG AGATCAAACG TGTCTGGGAT
GAGAATTATC AGGTCTACGG GGTCCGTAAG GCATGGCATC AGCTGAAGCG CGAGGGCTTT
GAGCTGGCGC GCTGCACGGT GGAGCGGCTG ATGAAACATA TCGGCATCCG TGGGGCTGTG
CGCGGCAAGG TGGTCAAAAC AACCGTCCCT GACACGTCAG CGCCTTGTCC GCGTGACAAG
GTGAACCGCG TGTTCCGGGC ACCAGCCCCG AACCTCCTCT GGGTCAGCGA TTTTACCTAC
GTGTCGACAT GGCAGGGCTT TGTCTATGTT GCCTTCGTCA TCGACACGTT TGCAGATCGC
ATCGTCGGCT GGCGGGTCTC ACGGTCGGCC AAAACAGACT TTGTTCTCGA TGCTCTTGAA
CAGGCCCTGC ATGATCGACG GCCGGTCCAA AAGAGCGGCT TGGTCCACCA CTCGGATCGT
GGCGGGCAAT ATTTATCCAT TCGCTATACC GAGCGTCTGG CCGAAGCTGG CATCGAGCCA
TCGGTCGGCA GCGTCGGGGA TTCCTATGAC AACGCCCTCG CAGAAACGAT CAATGGTCTA
TACAAAACCG AGCTGGTCCA TCGTCAAGGA CCGTGGCGCA ATATGCAGGA TCTGGAAATG
GCGACACTCG GCTGGGTCGA TTGGTTCAAC AACCGGCGCC TGCTTGGACC CATCGGAAAC
ATCCCGCCAG CAGAGGCTGA AGACAACTTC TATGCATACC GCGAAGTGCT CGATATGGTC
GCGTGA
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| Protein sequence | MIAFIEDQRV VYGVESICRV LPIAPSTFYH HLACLADPSK ASARHQRDTE LRPEIKRVWD
ENYQVYGVRK AWHQLKREGF ELARCTVERL MKHIGIRGAV RGKVVKTTVP DTSAPCPRDK
VNRVFRAPAP NLLWVSDFTY VSTWQGFVYV AFVIDTFADR IVGWRVSRSA KTDFVLDALE
QALHDRRPVQ KSGLVHHSDR GGQYLSIRYT ERLAEAGIEP SVGSVGDSYD NALAETINGL
YKTELVHRQG PWRNMQDLEM ATLGWVDWFN NRRLLGPIGN IPPAEAEDNF YAYREVLDMV
A
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