Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dshi_3697 |
Symbol | |
ID | 5714227 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dinoroseobacter shibae DFL 12 |
Kingdom | Bacteria |
Replicon accession | NC_009955 |
Strand | - |
Start bp | 101306 |
End bp | 102217 |
Gene Length | 912 bp |
Protein Length | 303 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 641276615 |
Product | integrase family protein |
Protein accession | YP_001541911 |
Protein GI | 159046239 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG4974] Site-specific recombinase XerD |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATACATC ACCATGTAGA CCGCTTCGTC CAACTCAACC GCACACTCGG AAAGAAGTTC GCCGCACAGG AGACATCCTT GCGCGCCTTC GCGGATTTCG CTGCGGAGCG ATCCATCACG CATCTGACGG CAGCGCTGAT ACTGGAATGG GCCGGCGGCG CCGCGACGCC TTATGCTGCG CAGGCGCGGT TTGATCGCGC CCGCGCATTT GCGGTGTTCC TGCACGCGGA AGATTCACGG CACGAGATAC CTGCGATGGG GCTGCTGGGT CGGTCACGAC GGAGGCGGCC CGCTCCCCAT ATTCTGACGC GGGACCAAAT CAGTCGGATC ATGCATGAAG CGCTTCTGGT GCCCGGCCTG ACACCGATCA GCCCGCTGAC TTATCATAAC CTGTTCGGGC TGCTCGCTTC GACGGGCTTG CGGATTTCGG AGGCATTGTC CCTTCAGTGC GACGATCTTA CGGCGGAGGG CCTCATGGTC CGGAGCGGCA AGTTTGGCAA GAGTCGTCTC GTGCCAATAC ATTTTTCGAC CCGTGCCGCG CTGGAACGAT ATCTCGAAGC CCGCGCGGCC GTGCGTAACG CGAACGACGA TCTCTTCGTT CTTGGTCATG GTCATGCCCC GACAAAAACA CGGGCCCATG TGGTCTTCGT TCGGATCGTC CGGAAGCTTG GGTACCGCAA TCCGACAGGG CCCGGCCCCC GGCTTCACGA TCTGCGCCAC ACCTTCGCCG TGCGATCCCT TGAGGCCTGT GGGAACAACC CGCAGGCAGT GTTGCGGCAC ATGAAGGCTC TGAGCACCTA CCTCGGCCAT GTCGATATTG CCAACACCTA CTGGTACCTT GAGGCTACGC CGGTTCTTCT GAAGATGATT GCGGCAACCG CCGAGGAGAC CTGGATCGGA GGTGCGGCAT GA
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Protein sequence | MIHHHVDRFV QLNRTLGKKF AAQETSLRAF ADFAAERSIT HLTAALILEW AGGAATPYAA QARFDRARAF AVFLHAEDSR HEIPAMGLLG RSRRRRPAPH ILTRDQISRI MHEALLVPGL TPISPLTYHN LFGLLASTGL RISEALSLQC DDLTAEGLMV RSGKFGKSRL VPIHFSTRAA LERYLEARAA VRNANDDLFV LGHGHAPTKT RAHVVFVRIV RKLGYRNPTG PGPRLHDLRH TFAVRSLEAC GNNPQAVLRH MKALSTYLGH VDIANTYWYL EATPVLLKMI AATAEETWIG GAA
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