Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dshi_3690 |
Symbol | |
ID | 5714220 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dinoroseobacter shibae DFL 12 |
Kingdom | Bacteria |
Replicon accession | NC_009955 |
Strand | - |
Start bp | 93569 |
End bp | 94297 |
Gene Length | 729 bp |
Protein Length | 242 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 641276608 |
Product | ParB-like nuclease |
Protein accession | YP_001541904 |
Protein GI | 159046232 |
COG category | [S] Function unknown |
COG ID | [COG5489] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.456588 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTCGCAG GAACCCTCAC CCGCAACGTC GAGACCGCAG CCGCTCAGTA CACCGGCATG ATCCATTCGA CACGTTTCGA TATCGCCATC CAGCTTGAAA ACCGCCCGAA GATGTCCGAA CGCAGCCCGG ATTTTGACGT AACGGCAGTC AACAAATCAG GCCGCAAGGT GCGCATCGGC ACGGCCTGGA ACGAGACCGG CAATACCAGC GGCAATCCCT ACATCTCGAT GCAGATCGAT GTCGGCTTGA GTCCGTTCCG GGTCAACGCG GTGCAGACGA AAGAGGCGCG CGCGACCCAA AGCGGGGAGT TCGAGATCAT CCCGCTGGTC TCGAACGGCC TGATGAAATC CGGCTCGATC TCGGGCGAGC TCACCGCCAT GGACGCCGAC AACGCCTTCA CCGGCTACAT CGCCAACATG ATGTTCGATC TGGAGTTCAT GCTTATCGAG AACAGCTACA AATCCGAGGA GACCCACCCC GATTACCGCA TCGAGGTCAG CTCGCCCCGT GGCACACCGA TCCGCGTCGG CTCGGCCTGG ATGGCGAAAA GCAGCCGCAC GGGCAATGAC TACCTGTCGT TGCTGATCAA CACGCCTGAT GGCGACCTGC GCGTCAACGC CGTGCAGAAC GAAGAACAGC GCGGCGGGCA GACCTTCTCG ATCATCCCGT TCATCGACAG CGGTGAGCAG CCGCAGGACG CGGGCGCGGG GCTCTCCTTG GTCGCCTAA
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Protein sequence | MFAGTLTRNV ETAAAQYTGM IHSTRFDIAI QLENRPKMSE RSPDFDVTAV NKSGRKVRIG TAWNETGNTS GNPYISMQID VGLSPFRVNA VQTKEARATQ SGEFEIIPLV SNGLMKSGSI SGELTAMDAD NAFTGYIANM MFDLEFMLIE NSYKSEETHP DYRIEVSSPR GTPIRVGSAW MAKSSRTGND YLSLLINTPD GDLRVNAVQN EEQRGGQTFS IIPFIDSGEQ PQDAGAGLSL VA
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