Gene Dshi_3690 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_3690 
Symbol 
ID5714220 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009955 
Strand
Start bp93569 
End bp94297 
Gene Length729 bp 
Protein Length242 aa 
Translation table11 
GC content61% 
IMG OID641276608 
ProductParB-like nuclease 
Protein accessionYP_001541904 
Protein GI159046232 
COG category[S] Function unknown 
COG ID[COG5489] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.456588 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCGCAG GAACCCTCAC CCGCAACGTC GAGACCGCAG CCGCTCAGTA CACCGGCATG 
ATCCATTCGA CACGTTTCGA TATCGCCATC CAGCTTGAAA ACCGCCCGAA GATGTCCGAA
CGCAGCCCGG ATTTTGACGT AACGGCAGTC AACAAATCAG GCCGCAAGGT GCGCATCGGC
ACGGCCTGGA ACGAGACCGG CAATACCAGC GGCAATCCCT ACATCTCGAT GCAGATCGAT
GTCGGCTTGA GTCCGTTCCG GGTCAACGCG GTGCAGACGA AAGAGGCGCG CGCGACCCAA
AGCGGGGAGT TCGAGATCAT CCCGCTGGTC TCGAACGGCC TGATGAAATC CGGCTCGATC
TCGGGCGAGC TCACCGCCAT GGACGCCGAC AACGCCTTCA CCGGCTACAT CGCCAACATG
ATGTTCGATC TGGAGTTCAT GCTTATCGAG AACAGCTACA AATCCGAGGA GACCCACCCC
GATTACCGCA TCGAGGTCAG CTCGCCCCGT GGCACACCGA TCCGCGTCGG CTCGGCCTGG
ATGGCGAAAA GCAGCCGCAC GGGCAATGAC TACCTGTCGT TGCTGATCAA CACGCCTGAT
GGCGACCTGC GCGTCAACGC CGTGCAGAAC GAAGAACAGC GCGGCGGGCA GACCTTCTCG
ATCATCCCGT TCATCGACAG CGGTGAGCAG CCGCAGGACG CGGGCGCGGG GCTCTCCTTG
GTCGCCTAA
 
Protein sequence
MFAGTLTRNV ETAAAQYTGM IHSTRFDIAI QLENRPKMSE RSPDFDVTAV NKSGRKVRIG 
TAWNETGNTS GNPYISMQID VGLSPFRVNA VQTKEARATQ SGEFEIIPLV SNGLMKSGSI
SGELTAMDAD NAFTGYIANM MFDLEFMLIE NSYKSEETHP DYRIEVSSPR GTPIRVGSAW
MAKSSRTGND YLSLLINTPD GDLRVNAVQN EEQRGGQTFS IIPFIDSGEQ PQDAGAGLSL
VA