Gene Dshi_3680 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_3680 
Symbol 
ID5714210 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009955 
Strand
Start bp83472 
End bp84071 
Gene Length600 bp 
Protein Length199 aa 
Translation table11 
GC content61% 
IMG OID641276598 
Productresolvase domain-containing protein 
Protein accessionYP_001541894 
Protein GI159046222 
COG category[L] Replication, recombination and repair 
COG ID[COG1961] Site-specific recombinases, DNA invertase Pin homologs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCAAAA CCCGCGTCGG TTATGCCCGC TGCTCGACCG ACAAACAGGA TCTCGCAGCG 
CAACGGACAG CGCTCCTCGC TCTCGATGTC GCGGAAGACC GGATCTACAC CGATCACGGC
CTGACCGGCA CGAACCGGGA GCGGCCAGGT CTGGCCCAGG CACTCGCAGC AGTCCGCGAA
GGGGACACGC TTGTCGTGCC GAAACTGGAC CGGCTGGCGC GGTCGGTTCC CGACGCCCGG
GCTATCGCTG ATGAACTGGA AAAGCGCGGG GTGAAACTGG CATTGGGCGC ATCGGTCCAT
GACCCGACCG ATCCGATGGG TAAGATGTTC TTCAACATCC TCGCCACATT TGCCGAATTC
GAGGCTGATC TGATCAGGAT GCGCACCAAG GAAGGTATGG CCATCGCCCG CGCCAAGGGA
CGACTGAAGG GCAAAAAGCC AAAACTATCG GATCGTCGTC AGGCAGAATT GCGCCGCATG
TATGACACGG GTGACTACTC GATCAGCGAT CTGGCAGAGC TGTTCGACGT ATCGAGGCCC
ACCGTCTATC GGGTCTTGCA GCGGACACCG AGCGCCGATG CGTCTTCGGC TGCGGTATAG
 
Protein sequence
MTKTRVGYAR CSTDKQDLAA QRTALLALDV AEDRIYTDHG LTGTNRERPG LAQALAAVRE 
GDTLVVPKLD RLARSVPDAR AIADELEKRG VKLALGASVH DPTDPMGKMF FNILATFAEF
EADLIRMRTK EGMAIARAKG RLKGKKPKLS DRRQAELRRM YDTGDYSISD LAELFDVSRP
TVYRVLQRTP SADASSAAV