Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dshi_3678 |
Symbol | |
ID | 5714208 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dinoroseobacter shibae DFL 12 |
Kingdom | Bacteria |
Replicon accession | NC_009955 |
Strand | - |
Start bp | 81019 |
End bp | 81843 |
Gene Length | 825 bp |
Protein Length | 274 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 641276596 |
Product | ATP-binding protein |
Protein accession | YP_001541892 |
Protein GI | 159046220 |
COG category | [R] General function prediction only |
COG ID | [COG2842] Uncharacterized ATPase, putative transposase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.478693 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCCGCC AGACTCGCCG GACCGGTACT TTCCTCGTCA CCCGCGAACA TAAGCGGTTT GTCGAATTCG CGAACGCTGT GCGCCGCAAC GCAACCATCG GCTTGTGTCA TGGTCGGGCG GGCGTTGGCA AAACCTTGTC AGCCCGCCGC TATGCCAATT GGGACCTGAT CGAACCGCTG ATAACGACAT GGGGTAGGCG TGAAGACTCG GACAAGAAAG TGTATGCAGC CTCGTCCCGC GCCCGTACCT TGTTCTATAC ACCGCCGGTG GGCGGCAGTA TCTCGGCGCT GCGCAAGGAC ATTCAACCAT TTATCATGCG ACTATGCGTT TGCATTGACA GCTACGGGAA CCCCAAGTGG GCGGAGCGAC CTCTAACACC GCTTGGCCTG ATAGAGTTGG TAATCATTGA CGAAGCCGAA CGCCTTACCA TGACCGGCCT GGAGTTCCTG CGCGACCAGT TCGATCGCAG TGACGCTGGG CTGATCCTGA TCGGTATGCC CGGCATTGAA AAACGGATGT CGCAATACCC GCAACTCTAC AGCCGAATAG GTTTTGTGCA TGAATACCCA CCGCTTTCGA AGGATGAGAT GCAATTCGTT TTGCAGCGGC AATGGAGGAA ATGGGGCTTT GGCCAGGATG ATGCAGATTT CACCGACGAC CGTGTTGCTG CTGCCATCAT CCGACTGACA GCTGGCAACT TCCGTCTTTT GCAACGCCTG TTCATGCAGA TCGAACGCAT CGCCCGCATC AACGAAATGG CCGCAATCAC CGAAGATGTG GTAGAGGCCG CCGCTCAGAC CCTCGTCATC GGAAACGCCA ATTAA
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Protein sequence | MSRQTRRTGT FLVTREHKRF VEFANAVRRN ATIGLCHGRA GVGKTLSARR YANWDLIEPL ITTWGRREDS DKKVYAASSR ARTLFYTPPV GGSISALRKD IQPFIMRLCV CIDSYGNPKW AERPLTPLGL IELVIIDEAE RLTMTGLEFL RDQFDRSDAG LILIGMPGIE KRMSQYPQLY SRIGFVHEYP PLSKDEMQFV LQRQWRKWGF GQDDADFTDD RVAAAIIRLT AGNFRLLQRL FMQIERIARI NEMAAITEDV VEAAAQTLVI GNAN
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