Gene Dshi_3678 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_3678 
Symbol 
ID5714208 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009955 
Strand
Start bp81019 
End bp81843 
Gene Length825 bp 
Protein Length274 aa 
Translation table11 
GC content56% 
IMG OID641276596 
ProductATP-binding protein 
Protein accessionYP_001541892 
Protein GI159046220 
COG category[R] General function prediction only 
COG ID[COG2842] Uncharacterized ATPase, putative transposase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.478693 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCGCC AGACTCGCCG GACCGGTACT TTCCTCGTCA CCCGCGAACA TAAGCGGTTT 
GTCGAATTCG CGAACGCTGT GCGCCGCAAC GCAACCATCG GCTTGTGTCA TGGTCGGGCG
GGCGTTGGCA AAACCTTGTC AGCCCGCCGC TATGCCAATT GGGACCTGAT CGAACCGCTG
ATAACGACAT GGGGTAGGCG TGAAGACTCG GACAAGAAAG TGTATGCAGC CTCGTCCCGC
GCCCGTACCT TGTTCTATAC ACCGCCGGTG GGCGGCAGTA TCTCGGCGCT GCGCAAGGAC
ATTCAACCAT TTATCATGCG ACTATGCGTT TGCATTGACA GCTACGGGAA CCCCAAGTGG
GCGGAGCGAC CTCTAACACC GCTTGGCCTG ATAGAGTTGG TAATCATTGA CGAAGCCGAA
CGCCTTACCA TGACCGGCCT GGAGTTCCTG CGCGACCAGT TCGATCGCAG TGACGCTGGG
CTGATCCTGA TCGGTATGCC CGGCATTGAA AAACGGATGT CGCAATACCC GCAACTCTAC
AGCCGAATAG GTTTTGTGCA TGAATACCCA CCGCTTTCGA AGGATGAGAT GCAATTCGTT
TTGCAGCGGC AATGGAGGAA ATGGGGCTTT GGCCAGGATG ATGCAGATTT CACCGACGAC
CGTGTTGCTG CTGCCATCAT CCGACTGACA GCTGGCAACT TCCGTCTTTT GCAACGCCTG
TTCATGCAGA TCGAACGCAT CGCCCGCATC AACGAAATGG CCGCAATCAC CGAAGATGTG
GTAGAGGCCG CCGCTCAGAC CCTCGTCATC GGAAACGCCA ATTAA
 
Protein sequence
MSRQTRRTGT FLVTREHKRF VEFANAVRRN ATIGLCHGRA GVGKTLSARR YANWDLIEPL 
ITTWGRREDS DKKVYAASSR ARTLFYTPPV GGSISALRKD IQPFIMRLCV CIDSYGNPKW
AERPLTPLGL IELVIIDEAE RLTMTGLEFL RDQFDRSDAG LILIGMPGIE KRMSQYPQLY
SRIGFVHEYP PLSKDEMQFV LQRQWRKWGF GQDDADFTDD RVAAAIIRLT AGNFRLLQRL
FMQIERIARI NEMAAITEDV VEAAAQTLVI GNAN