Gene Dshi_3668 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_3668 
Symbol 
ID5714198 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009955 
Strand
Start bp69101 
End bp69835 
Gene Length735 bp 
Protein Length244 aa 
Translation table11 
GC content56% 
IMG OID641276586 
Producthypothetical protein 
Protein accessionYP_001541882 
Protein GI159046210 
COG category[R] General function prediction only 
COG ID[COG0670] Integral membrane protein, interacts with FtsH 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.16725 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000130091 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGAAAAAA CTGTTCAACC ACGCGACTAT GTATCTCCCG AAGGGCTTCA GTACGATGTC 
GGATTGCGCA AGTACCTGAC AGGCGTATTT GCCTATATGG GCGGCGGGCT GGTGCTATCG
GCACTGGTGG CCTTTGCTGT GGCAAATGTT GCGCCTGTCA CGGCGCTCAT CTTTGGAACA
CCTCTCAAGT GGGTCGCAAT CTTCGCGCCA CTGGCGTTGG TGATGTTCGC GTCTTTCCGT
TTTGAGCGAC TTTCCGTAGG TGCTCTGCAA GGTCTCTTCT GGGGATTCGC GGCCCTCATG
GGCGTGTCGC TCGCCAGCGC GCTGCTGGTT TTCACAGGCA CAAGCATCGT TCAGGCATTC
CTGAGCGCGT CCATCATTTT TCTGACAATG GCGCTGTGGG GCTACACGAC GAAACGCGAT
CTGTCCGGGT GGGGCAGTTT CCTGATGATC GGCCTGATCG GCGTCATCGG TGCCTCTATC
GTCAACCTGT TCCTAGCATC GGGTGCACTG GCAATGGCCG TCTCTGTGAT CGGGGTGATT
GTCTTTACCG GCCTCACAGC ATCGGACATG CAACGCCTGC GGAACGAGTA CCTGGCACAT
TGTGAGCAAG GTGGCGTCGC TACCCAAGCA AACCTCGGCA AACTTCAGAT AATGGGGGCG
CTCTCCCTTT ATCTCAATCT CATCAACCTG TTTCAAATGC TGCTGAGCTT GTTCGGCCAG
CGGCAGGAAG GATAA
 
Protein sequence
MEKTVQPRDY VSPEGLQYDV GLRKYLTGVF AYMGGGLVLS ALVAFAVANV APVTALIFGT 
PLKWVAIFAP LALVMFASFR FERLSVGALQ GLFWGFAALM GVSLASALLV FTGTSIVQAF
LSASIIFLTM ALWGYTTKRD LSGWGSFLMI GLIGVIGASI VNLFLASGAL AMAVSVIGVI
VFTGLTASDM QRLRNEYLAH CEQGGVATQA NLGKLQIMGA LSLYLNLINL FQMLLSLFGQ
RQEG