Gene Dshi_3660 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_3660 
Symbol 
ID5714190 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009955 
Strand
Start bp61583 
End bp62512 
Gene Length930 bp 
Protein Length309 aa 
Translation table11 
GC content65% 
IMG OID641276578 
Producthypothetical protein 
Protein accessionYP_001541874 
Protein GI159046202 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0855564 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00000145048 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGGCTTACG ACACTGCAAA CACCTACGAG ACCATCGAGC TTTTCGGGCT GAGCGAGAAG 
GACGCACAGC TGCCGATCCC GGAAGATCAC ATCCTGACCG ACCACATCAT TCGCGAAAGC
TTCGAGGCTT TGCTCGGGCA GTTGCGCGGG ACCGGGCTTG AAGCCGAAAT CGAACCGCTG
GCCCATGGGC TCGCGACGAT CCTGCAGCGC CGCAAGGTGG CGCTTGGCAA GGAGGTCGAC
CGCACCGCCG ACAAGATCGG CGCGCTGGCA AAATCCCACG ACGGATCGGA GATCGCCGAG
ACCGCGCTCG AAGAGGCGCA AGCGCGCTTT GTGCAACTGC GCGAGATTGT CGGCGCCATC
GAGGTGATGA GCGAGGCGGC GGCGGAATGT TACGAGATCG AAACGGGCCA CGCCTTCATC
CCGGCAGCCG GGTCGCGCGC AAGCGTCCGG GCGCAGGAGA CCGGGGCGGT CTTCGAGGCG
CGGCAGCTCC TCGAGCAGCA CGACCGCGAG ACCGCCGAGA AGTCGAAAGT CGAGGGGGTT
CCCCTGATCG TCTCAGGCGC CACCGACTGG ACCGATGTTG ATGTGATCTT CAACACGCTC
GACAAGGTTC GCGAACGGAT CAAGCAGAAC CGCAACCAGG AGATCTTCCT CTGCCACAAG
GGTGGCAAGC ACGGGGCGGA GATGATTGCG GCTCGGTGGG CTCGGGCACG CGGGGTCGCA
CAAGCGCGCT TCGATCCGCG CTGGTCCGCG CACGGGCGGG CGGCACCGTT CAAGTGCAAC
GACGAAATGC TGGACGACAA GTTCGCGGCG ACGGGGGTTG TTCTCTTCGG CGGCAACGGG
GTCGCGCTGA ACCTCGGGCA GAAGGCGGAA GCGAAAGGCC TGACGGTCAT GCGGGTTGCG
GACCCGGCGA AGAAGACTGC GCAGGATTGA
 
Protein sequence
MAYDTANTYE TIELFGLSEK DAQLPIPEDH ILTDHIIRES FEALLGQLRG TGLEAEIEPL 
AHGLATILQR RKVALGKEVD RTADKIGALA KSHDGSEIAE TALEEAQARF VQLREIVGAI
EVMSEAAAEC YEIETGHAFI PAAGSRASVR AQETGAVFEA RQLLEQHDRE TAEKSKVEGV
PLIVSGATDW TDVDVIFNTL DKVRERIKQN RNQEIFLCHK GGKHGAEMIA ARWARARGVA
QARFDPRWSA HGRAAPFKCN DEMLDDKFAA TGVVLFGGNG VALNLGQKAE AKGLTVMRVA
DPAKKTAQD