Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dshi_3660 |
Symbol | |
ID | 5714190 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dinoroseobacter shibae DFL 12 |
Kingdom | Bacteria |
Replicon accession | NC_009955 |
Strand | - |
Start bp | 61583 |
End bp | 62512 |
Gene Length | 930 bp |
Protein Length | 309 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641276578 |
Product | hypothetical protein |
Protein accession | YP_001541874 |
Protein GI | 159046202 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0855564 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 2 |
Fosmid unclonability p-value | 0.00000145048 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGGCTTACG ACACTGCAAA CACCTACGAG ACCATCGAGC TTTTCGGGCT GAGCGAGAAG GACGCACAGC TGCCGATCCC GGAAGATCAC ATCCTGACCG ACCACATCAT TCGCGAAAGC TTCGAGGCTT TGCTCGGGCA GTTGCGCGGG ACCGGGCTTG AAGCCGAAAT CGAACCGCTG GCCCATGGGC TCGCGACGAT CCTGCAGCGC CGCAAGGTGG CGCTTGGCAA GGAGGTCGAC CGCACCGCCG ACAAGATCGG CGCGCTGGCA AAATCCCACG ACGGATCGGA GATCGCCGAG ACCGCGCTCG AAGAGGCGCA AGCGCGCTTT GTGCAACTGC GCGAGATTGT CGGCGCCATC GAGGTGATGA GCGAGGCGGC GGCGGAATGT TACGAGATCG AAACGGGCCA CGCCTTCATC CCGGCAGCCG GGTCGCGCGC AAGCGTCCGG GCGCAGGAGA CCGGGGCGGT CTTCGAGGCG CGGCAGCTCC TCGAGCAGCA CGACCGCGAG ACCGCCGAGA AGTCGAAAGT CGAGGGGGTT CCCCTGATCG TCTCAGGCGC CACCGACTGG ACCGATGTTG ATGTGATCTT CAACACGCTC GACAAGGTTC GCGAACGGAT CAAGCAGAAC CGCAACCAGG AGATCTTCCT CTGCCACAAG GGTGGCAAGC ACGGGGCGGA GATGATTGCG GCTCGGTGGG CTCGGGCACG CGGGGTCGCA CAAGCGCGCT TCGATCCGCG CTGGTCCGCG CACGGGCGGG CGGCACCGTT CAAGTGCAAC GACGAAATGC TGGACGACAA GTTCGCGGCG ACGGGGGTTG TTCTCTTCGG CGGCAACGGG GTCGCGCTGA ACCTCGGGCA GAAGGCGGAA GCGAAAGGCC TGACGGTCAT GCGGGTTGCG GACCCGGCGA AGAAGACTGC GCAGGATTGA
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Protein sequence | MAYDTANTYE TIELFGLSEK DAQLPIPEDH ILTDHIIRES FEALLGQLRG TGLEAEIEPL AHGLATILQR RKVALGKEVD RTADKIGALA KSHDGSEIAE TALEEAQARF VQLREIVGAI EVMSEAAAEC YEIETGHAFI PAAGSRASVR AQETGAVFEA RQLLEQHDRE TAEKSKVEGV PLIVSGATDW TDVDVIFNTL DKVRERIKQN RNQEIFLCHK GGKHGAEMIA ARWARARGVA QARFDPRWSA HGRAAPFKCN DEMLDDKFAA TGVVLFGGNG VALNLGQKAE AKGLTVMRVA DPAKKTAQD
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