| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_3656 |
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| Symbol | |
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| ID | 5714186 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009955 |
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| Strand | - |
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| Start bp | 57373 |
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| End bp | 59706 |
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| Gene Length | 2334 bp |
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| Protein Length | 777 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641276574 |
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| Product | relaxase/mobilization nuclease family protein |
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| Protein accession | YP_001541870 |
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| Protein GI | 159046198 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0486452 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.000000302342 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGCGGCTGA ATGATGCCGT CCATGCCGTC ACGGGCGAGG TCTTTCGGGA TGGCTGGAGC
CGCGTCCGGG GCTCAATGCA GGGGCTGCAC GTGGCCAAGC AGACCCAGCT TGTGCGCGCG
GCAGCAGGGC ATCGGCCAGC AGTCTTCAAG GCGATCCGGG GCGGGGGAAC GCATACCAAA
TCGCAGCTCG CAAACCAGCT CGATTACCTC ACCACCAAGT CCACCCATAT CGTGGACAGT
AGCGGGTTCT TGGATGGCAA GACGAAGCTC GAGGCGGGTG ACATCAAGGA TCTGACCGAG
CGCTTTGCCA AGCGGTGGGA TGCGGGCTTC AAGCCCAAGC TTGGGCAGAC CACCCACATG
CTCATGTCCT TCCCAATCGG CACGCGGGGC GAGGATGTGC GCGACATCGC GACGGATGTG
GCCGAGCGGT TCTTCCAGAC CGACGCGGGG CATTTCGACT ACATCATCGC GGTGCATGAG
GACCGCGATC ACCCGCATGC GCATTTGGTG CTGAACCGCC GCTCGCAGGA AGGCGAGTTC
TTCTTTCTGG GGCGCAACCA CCGCTTCAAC TATGACGACT TCCGCCTCGC CATGGTCGAG
GAGGCCGAAA AGTATGGCGT GCGCCTGGAG GCCACGCGCC GGGTGGATCG CGGGGTCGTG
CATTACCCGG CCCGCACTAG CGAGGTCTAT GCCGCGAAAG AAGAGGGTCG CGCGCCCCGC
GAGCGCGAAC GCGTGGGGCA GGACCTGACC CGGACGCTGG CGGAGATCGC CAATACCAGA
ACCGTCTACC ATTCGCTTGC CGCAGAGGCC TCCCGGGAGG CCCGGGAAGA CATCGCCGCG
GCACTCTTCC GCGCGGGCGA GGTGCTGGCG CATGGCGGAC AGATGGACCG AACAGGAGAT
GTGTATATGG CCGAGGATCA AAGCTTCGAG GATCTGAGAA GCCTCTATGC GGAAAAGCTC
GCGCGGGTGC AGGGCATGAT CGCCGAGAAG TCTGACGCGG AACGTCCCGT GCTGGAAAAA
CGCCTTATCG AGATCCAGAC GCAGGTCCAG CACATGCAGC CCTTGGGGCT GCGATCATCC
ACGCTGTCAG AGACCCCCTC GGAAGGCGGG ATCTATTCCG AAGCCAATAT CGACGCCAGC
CAGCGCGAGC GACTGGCCGA GCCCGACCTG AGATCGCGCA TTGACGCGGC ACTACGGGGC
ACCGCGATCA GCACATCGGA AGTGGTGGCC CGGATCGAGA CGGGCGCCTC AAATGCAGCG
CTCGAGCATC AATGGATCGC CAATGATCTC TCCAAAGTGG CTGAGGCGCG CGATCTGAAC
CTCGAACGCC GCGCCGATCT GGAACAGGCG CGCGACATTC TCAACGATGT GCACGTCGAA
CTTGGCACGC TCTTGGAGCG GGAGAACGTG CTGCGCCGGG ATGGTGTCAT GGAAGCGGAA
CCGGTCAGCG AGCAGTTCCA TTATCATGAG GACGCGGTCC GGGCGATGGA AGGGACAATC
CGTCAGGAGA TGCGCGCAGA CGGCCTGACC GCGCAGCAGA TCGAGGACCG GGACTGGGAG
GTTGTCTCAC GGGCGGAGCG CCGGATCGAG ACGGAGCAGC GTGCATATCT CGAGGCACAC
CCGGATCTGC TCGCACGCCC TGGCGATGTG ATTGACCGGT CTGAGCCTTA CAGGGAGACC
ATTACCGATG CGGCCCGCGC CAGCGAGATC ACCCGTGAGG TCGACCGGAT CATGGAGGCA
CGCGACGTCC GCACGCCCGT TGCAGATGCT GTCACGGATG ACTTACGAGC GCGCTATCCG
GACATGCCGT CCCACCTCGC CCGCGGGCTT GGCGCGACCT ATGCGGCCGT CGTCGAGATC
CGGGACACGG AGGCCATCAA TCAGGTCCGC CGCGAAAACG AGATGCGCGA CGGGCTTGGG
TCTGGCACGC GCGACGACAT CATCGCGACC CGCGATGAAA CTGCGCCGCA GTCTGACCGT
GCCGACCGCC TTGCAGACGA GATTGCGCGT GTCGTGGACC ATGAACGGGC GGGGGAGTTG
TCCGCGCCCT TCGAGACCGA GGCGGAGCGG GACGCCTTCC GCGGCGAGAT CGCGCGGGTG
CTGGACGTTC GCCAACTAGA CCGGCTCACA TCCGGCGATG CCGATGCGCT GGACAAGGTT
CTCGAGGACC GCCTCGACCG GCTCTATGTC GCCAAGGTCT ACCTGCAATC GGATGCAGCG
ACGGCCAACA CGGAGGCCTT GCGCCAGGTG GTCGATGATC TTGCCGACAC CGAATATGAA
AAACACCGCA CTGGCGATGT GGATGGCGAG ATCGAGCGGG GTCAGGTCCA TTGA
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| Protein sequence | MRLNDAVHAV TGEVFRDGWS RVRGSMQGLH VAKQTQLVRA AAGHRPAVFK AIRGGGTHTK
SQLANQLDYL TTKSTHIVDS SGFLDGKTKL EAGDIKDLTE RFAKRWDAGF KPKLGQTTHM
LMSFPIGTRG EDVRDIATDV AERFFQTDAG HFDYIIAVHE DRDHPHAHLV LNRRSQEGEF
FFLGRNHRFN YDDFRLAMVE EAEKYGVRLE ATRRVDRGVV HYPARTSEVY AAKEEGRAPR
ERERVGQDLT RTLAEIANTR TVYHSLAAEA SREAREDIAA ALFRAGEVLA HGGQMDRTGD
VYMAEDQSFE DLRSLYAEKL ARVQGMIAEK SDAERPVLEK RLIEIQTQVQ HMQPLGLRSS
TLSETPSEGG IYSEANIDAS QRERLAEPDL RSRIDAALRG TAISTSEVVA RIETGASNAA
LEHQWIANDL SKVAEARDLN LERRADLEQA RDILNDVHVE LGTLLERENV LRRDGVMEAE
PVSEQFHYHE DAVRAMEGTI RQEMRADGLT AQQIEDRDWE VVSRAERRIE TEQRAYLEAH
PDLLARPGDV IDRSEPYRET ITDAARASEI TREVDRIMEA RDVRTPVADA VTDDLRARYP
DMPSHLARGL GATYAAVVEI RDTEAINQVR RENEMRDGLG SGTRDDIIAT RDETAPQSDR
ADRLADEIAR VVDHERAGEL SAPFETEAER DAFRGEIARV LDVRQLDRLT SGDADALDKV
LEDRLDRLYV AKVYLQSDAA TANTEALRQV VDDLADTEYE KHRTGDVDGE IERGQVH
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