| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_3654 |
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| Symbol | |
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| ID | 5714184 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009955 |
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| Strand | - |
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| Start bp | 53399 |
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| End bp | 55099 |
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| Gene Length | 1701 bp |
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| Protein Length | 566 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 641276572 |
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| Product | hypothetical protein |
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| Protein accession | YP_001541868 |
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| Protein GI | 159046196 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.773483 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.0000658966 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGTCAGATT ACAGTCAACA AGGTGATGAC GCCGAATATA CACTAAGTGC TGAATTTTGG
GATAAGGGGC AAGCCCTTGG CTTTCCGATC CAGTTTGATC TCGTGCTCAA GCACCTACGA
CAGGACATGA GGGACGACTG GTACTTCGAC TGCCTGCAAT ATGACGATAT ATTTAAGAAT
CCGGACGAGG CCAAACGCAT CGTCCTTTCT CTACTGCAGG AATGGAACGG TGTGTACCTC
GGCACCCGCA GCGTTGTCCG TAACATTCCC AAGAAAGGCT ATGGGGAACG CTACGGTCTG
GAAACCGATT TCTTTGATAG GTTTGTCTAT CAGGCGATCT GCACCTTCCT TATTCCTTAC
TATGACAGTC TGCTCAGCCA CCGAGTGCTA AGCTACCGCC ACGACTCTGC GCCGCAGAAC
TCCAAATACT TGTTCAAGAA CAAGATCGAT CGATGGTTCA CATTTGAGGG GATAACTCTT
ACGTTCGCCC GATCGAACCA GCATCTTCTG GTGACCGATC TCAGCAATTT TTTCGAGAAC
ATCTCGCGAG AGCAGATCAT CGCAGCCTTG GAGAAGGCTA TACCAGAGAT CGTGGCGACG
GGCCCTGAAA AGCTCCAAAT TCGCAATGCT ATCCGTACGT TGGACAGGCT GCTCGAACAA
TGGACGTTCA GCCGCGACCA TGGTCTACCA CAGAACCGGG ACGCATCTTC GTTTCTTTCC
AACATCCTGC TCTCTTCCGT TGATCGCGAA ATGGCCAAGA AGGGTTACGA TTACTACAGA
TACGTGGACG ACATCCGCGT TTTGGCCGAC ACGGAGATCC ACGCGCGCCG CGCACTCCAG
GATATTATCA GGGAGCTACG GAAGGTCGGC CTGAACATCA ACGCGAGTAA GACCGAGATA
TTGCCGCCTA ACGCTTCACT AGAGAAGTTG GTCGCCCACT TCCCTTCGCA AGACAGCGCG
ACCACCGCCA TTAATCAGAT GTGGCAATCT CGGAGCCGCA GAATTGTGAC CCGTTCTGTT
GAATACATCT TTGGTATCCT GACCAGCTGC ATTGAAGCTG GTGACACTCA AACGCGACAG
TTCCGCTTCG CGGTAAACCG CGTGGCCCAG ATTGTGGAAT CTGGCCTCTT CGACGTCGGC
GACGCACTAT CAGCTTCACT GCTCGATACG CTTTCCCGCT CGCTTTCGGA GCATGCTGTA
TCCACAGATC AATACTGCCG GCTTATTTCA ACACTAGACC GAGATGGCCA ATGCCTTCCG
GCGCTGGAGG GGTTTCTGTT GGCGGAGGAC CGAGCCATCC ACGATTGGCA GAACTACAAC
ATTTGGATGC TGCTTGGGTC GAAGAGACAC CGATCGGATA GGTTGGTTGA TCTCGCCGCT
AGGAAGCTCC ACGAGGACAT CAGGTCCGGC GAGGCTGCTG CCATCTTAAT CTGGCTGCGG
TGTGTCGGTG AGACGGCACT TATCCGCGGA TGCATCGAAA AGTTTAGCGA ACTGCCTTAT
CAGAACGCCC GCTATCTCTT GATTGCCTCC TCGGTGCTTC ACAAAGATGA CCTCAAGCCG
CTCTATGGCC TTGTGCCTAT CTGCCTCAAG GGCACAGGGC CAAGAGCCGA GCGTTACACC
AGCGAGGAAG GTCTTCCCTT TGCAAAACGG GAAGCGCCCG ATCTGCTAAA CCTTGTCGAC
GAGGTCAGTG AGTATGATTG A
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| Protein sequence | MSDYSQQGDD AEYTLSAEFW DKGQALGFPI QFDLVLKHLR QDMRDDWYFD CLQYDDIFKN
PDEAKRIVLS LLQEWNGVYL GTRSVVRNIP KKGYGERYGL ETDFFDRFVY QAICTFLIPY
YDSLLSHRVL SYRHDSAPQN SKYLFKNKID RWFTFEGITL TFARSNQHLL VTDLSNFFEN
ISREQIIAAL EKAIPEIVAT GPEKLQIRNA IRTLDRLLEQ WTFSRDHGLP QNRDASSFLS
NILLSSVDRE MAKKGYDYYR YVDDIRVLAD TEIHARRALQ DIIRELRKVG LNINASKTEI
LPPNASLEKL VAHFPSQDSA TTAINQMWQS RSRRIVTRSV EYIFGILTSC IEAGDTQTRQ
FRFAVNRVAQ IVESGLFDVG DALSASLLDT LSRSLSEHAV STDQYCRLIS TLDRDGQCLP
ALEGFLLAED RAIHDWQNYN IWMLLGSKRH RSDRLVDLAA RKLHEDIRSG EAAAILIWLR
CVGETALIRG CIEKFSELPY QNARYLLIAS SVLHKDDLKP LYGLVPICLK GTGPRAERYT
SEEGLPFAKR EAPDLLNLVD EVSEYD
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