Gene Dshi_3652 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_3652 
Symbol 
ID5714182 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009955 
Strand
Start bp50623 
End bp51540 
Gene Length918 bp 
Protein Length305 aa 
Translation table11 
GC content58% 
IMG OID641276570 
Producthypothetical protein 
Protein accessionYP_001541866 
Protein GI159046194 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00179272 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGTGCGCA AAGTCACACC TTCGCAATTT CGCAGTCAAC TGCGCCAAGC GCAGTCGAAA 
TACAATCAGG CTGTCAACCG TTACAATTCT GCCGTTCGTG CGCATAATCA GAAGGTCCGC
ACGGTCGTGA ACGAGTATAA CCAAGCCGTC AGCCGCTATA ATTCTTCGGC GCGGGCACAC
AACACCCGTG TGCAGCAGAA CCGCGCGAAG CTACAGAGGG AGTTGGCAAA GCTGTCAAGC
TCCACCAGCC AACCGCGCTA CGTCACCCTG CGTAGCTCGA TGAATACCGT TCAGCACTCC
TACTCGCGCC TTGAGGCGCG TGCGGATGCC GGCGCCTACT CTGAAAACTA CGACACTATT
CTTGATCTGT CGGAGCGTGA GGCGACGAAC AGCGCCAGTG TCATGAATGC CCTGCTCGAC
AATCCGAGCG ATCCGGAAGG GCAGGACGAA CTGCAGGACA GCGAGCTTGA TCCGATCCTG
AAACAGCTAT CTGGTGATGC GCTGGATCGC TGGCACGGCG CGCTGTTTTC ACTGAATCCG
CGCAACCCTG ATGCCGCGCG GCATTTCTGC ACCAGCGCCC GTGAGCTACT TACCACCATT
CTGGACAGCT TCGCGCCTAA CCAGAAGGTG CTGGAAGCCA TGCCCGACTG TGACACCATC
CCTTCGGGAG CACCGTCACG CCGGGCGAAA ATCCGTTATT TCCTATACCA GAACGGCATG
CAGGACGAGA CGCTGGAAGA GTTCGTGGAA GAAGATCTGG AGAATGTTGT CCAGCTCTTC
CGGGTATTCA ACGATGGCAC CCACGGCTCT TCGGGCCGCT TCACCCATGC CCAGCTTCTG
GCGATCCGAA AGCGCGTGGA GGGTGCCATT ACCTTCCTTT GGAATATCAT CCCGCAGACA
CTGCAGATGG CGGCCTGA
 
Protein sequence
MVRKVTPSQF RSQLRQAQSK YNQAVNRYNS AVRAHNQKVR TVVNEYNQAV SRYNSSARAH 
NTRVQQNRAK LQRELAKLSS STSQPRYVTL RSSMNTVQHS YSRLEARADA GAYSENYDTI
LDLSEREATN SASVMNALLD NPSDPEGQDE LQDSELDPIL KQLSGDALDR WHGALFSLNP
RNPDAARHFC TSARELLTTI LDSFAPNQKV LEAMPDCDTI PSGAPSRRAK IRYFLYQNGM
QDETLEEFVE EDLENVVQLF RVFNDGTHGS SGRFTHAQLL AIRKRVEGAI TFLWNIIPQT
LQMAA