Gene Dshi_3650 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_3650 
Symbol 
ID5714180 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009955 
Strand
Start bp48763 
End bp49173 
Gene Length411 bp 
Protein Length136 aa 
Translation table11 
GC content65% 
IMG OID641276568 
Producthypothetical protein 
Protein accessionYP_001541864 
Protein GI159046192 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0014977 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAGGCAGG CGCAGCACCT CGCCTTGGCC GCGCTGGCCC TAAGCCTGAC GCCTACCTTC 
GCCGTTGCCG AGCGCAACCT AGTGCCAACC CTCGATCGCA GCTTTGACGT CTGTCCAGAC
CGGCCCGCCG AGCCCGTCTG GATGCAGGAG ATCCCGCTCC GCCAAGCCTA TCAGCGGGTT
CTGGTTCAGG ACATCTATCG CGCCCAGAAT CTCGAGCGGG TCGTTGAGAT CGGCAACTGC
GACTGCGCGA CCCGGTTCCC GTCCTGGGAC GCAGCAGAGG CCACGTTTCG GGAAAGATAC
GCGAGCGACG AACGGTGGGA AATGCTGCAA TTCTCGGACG CATACAACCG CCGCGCCAAC
GCCGCCCGCC CTGCCGCCCA GGCAATCTGC GACGCCGCTG GCAATTGGTA A
 
Protein sequence
MRQAQHLALA ALALSLTPTF AVAERNLVPT LDRSFDVCPD RPAEPVWMQE IPLRQAYQRV 
LVQDIYRAQN LERVVEIGNC DCATRFPSWD AAEATFRERY ASDERWEMLQ FSDAYNRRAN
AARPAAQAIC DAAGNW