| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_3644 |
|---|
| Symbol | |
|---|
| ID | 5714174 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dinoroseobacter shibae DFL 12 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009955 |
|---|
| Strand | + |
|---|
| Start bp | 44031 |
|---|
| End bp | 44840 |
|---|
| Gene Length | 810 bp |
|---|
| Protein Length | 269 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 641276562 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001541858 |
|---|
| Protein GI | 159046186 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.065926 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGAGATT TGCTCGTGAG AACGGCCTTG GCCACAACGC TTGGGGCTTG CCTGCATCTC
GGCACCCTCT CCCCTGCCGC AGCGCAAGGC GTGCCGGTCG TCGATACCCA GAACATCGCG
CAAAACATCC AGCAGCTCCG GCAGATGATC GAAGACGAGA TCCTGCAGAA CGAGCAGCTG
ACGCAGCTCC GCGAACAGCT TGCCACACTC ACGGACCAAC TCGCGGAGCT GCAAAGAACC
TACGAAGCCC TGACCCGCCT TGCTGAACTG CCGGAAATCA TCCGCACCGA GATGGAGGAC
GAGCTGAACG GCCTGCTTGA TCAGGAGTTC GGAGACATCC TCGCCACCAT TGAAGCCATC
AAGACCGGCG ACTTCTCTGG CCTCTCTGGC TCCGGCGCGG GCGAGATCGA AACCCAGATG
GACCGGGTCC TGGCCGATCT CGGATTTGAC GATGACACCC TCTCGGAAAT GGCCACCAGC
GGAAATCCCG GAGCCAACCG CGTGGCAACG CAGGCAACAA CCGGCGCGCT CGTCTCAGCC
GCCGCCCAGA ACAGCTATGA AGACGCAGGC CAATCGCTCG AGCGGGTAGA CCGCCTCGTC
GGGCTCATCG ACGACATGGA CGAACTCAAG GAAAGCATCG ATCTCAACAC GCGCGTGACG
GCGGAACTGG CCATTGCGCT GGTCGCCATG TGGCAACTCG AAGCCGTGCA AACCGTGGGT
GACGGCACCG GCGGCGTGAT CGATGCCGCC ACCATCGCCG AGGAGCAGCG CTTCATGGAT
TTCACCTTGC CGGACCTACG GGCAGACTGA
|
|---|
| Protein sequence | MRDLLVRTAL ATTLGACLHL GTLSPAAAQG VPVVDTQNIA QNIQQLRQMI EDEILQNEQL
TQLREQLATL TDQLAELQRT YEALTRLAEL PEIIRTEMED ELNGLLDQEF GDILATIEAI
KTGDFSGLSG SGAGEIETQM DRVLADLGFD DDTLSEMATS GNPGANRVAT QATTGALVSA
AAQNSYEDAG QSLERVDRLV GLIDDMDELK ESIDLNTRVT AELAIALVAM WQLEAVQTVG
DGTGGVIDAA TIAEEQRFMD FTLPDLRAD
|
|---|
| |