Gene Dshi_3633 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_3633 
Symbol 
ID5714163 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009955 
Strand
Start bp35746 
End bp37389 
Gene Length1644 bp 
Protein Length547 aa 
Translation table11 
GC content61% 
IMG OID641276551 
Producthypothetical protein 
Protein accessionYP_001541847 
Protein GI159046175 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.584822 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACACAGG ATCAGCCCCG ACCGGCGACC ACGCCCCGCA CCCGCGCCAA AGCGCGTCAC 
ATCCTTGACA ACTATTACAT CGGACCGTCC CGCGACGACA GGGTGCTGGA AATCTGGGGC
TATACCCCTG AGATGAGCTA TGCCCCCGGG GATCGTGTCG CGCTGCATGT GTCAACCACC
GCAGCCGAAT GGGAGTTTGA GATCGGCCGC GACGGGCTTG AATACGTGCC GTTGCTGACC
AAGAGCGGCC TGCTGGGGGA GCACCATCCG ACGCCCCGGG ATTGCTCGGT CAAAGGGTGC
GGCTGGCCCG AAGCCTATGC AATCACGATC CCCAATGATT GGGCGCCCGG CGGTTATCTG
GTCACGTTTC GCGTCCGGCA AGACGATGAC ATGGTGGAAG AACACCATAT CATCCTGATC
AGAAGCGCGC CCGATGCCAC GCCACCGACC TATGTGCTGG TCTGTGCGAC GGGTACCTGG
CTGGCATATA ACTGCTGGGG CGGCTCCAAT CACTACGAGG GCATCACAGG GCCAAATGGC
GATGCCTTTT CACCCATCGT ATCTACACAG CGGCCATGGA CACGGGGGTT TTGCAGACTG
CCCAAGGGCG CGCCTCGCGC GCTGCGTGAA CAGCCGACCA GACCCGGCGA GATGGTGCGC
TATCCTTTTA TGGAGTGGGC CTATGCCTAT GGCTATTCCA AGAAATACGC CTCGGCGGGC
TGGGCGAGTT ACGAACGTCA TTTCGCGCGA TGGGCGGAGG CTGAGGGCTA TGGATTTGAC
GTGATTTCCC AGCATGACTT GCACCGCGAC CCGGATCTTT TGAACCGCTA TGCCTGTGCC
GTCTTCGTGG GTCATGATGA ATACTGGAGC GCAGACATGC GCGATGCTGT CGATGCCTAT
GTTGACGCTG GGGGACATGT CGCGCGGTTT GCCGGGAACT TCCTGTGGCA GACTCGGATC
GAAGACGAAG GCCGAACACA GATTTGCTAC AAATACATCG CGGATCAGGA CCCTTTGATG
GGGACGGAAC AGGAGCACCT TGTCTCGGGG GCCTTCGAGG TCGCGCCTGT GGACCGCCCC
GGCGCGTTGA CCTTCGGTGT CAACGCCCTG CGTGGCGTCT ATGCCGGCCT TGGCAACTGT
GTTGGTGGTG GCGCTGGCGG CTTTACGGTC TATCGCGACG ACCATTGGGC CTTTCAGGGT
GCCGGGCTTG GTTATGGCGA CGTGCTGGGC GCGCGCTCGC GGATTTTCGG CTACGAGGTC
GACGGTCTGG ACTATCGTTT CGAAGATGGG TTGCCGTTTC CCACATGCTT GGACGGTGCC
GTCCCGGAAA TCGAGATTCT CGCCATGGGG CTCGCCACCA ATATCGAGGC TGATCAAGGG
GTCTGGGGCG AAACGCTCTA TATCGGGTCA GCGGACGCGG CGTTCAAAGC GCAGGTGCTT
TTCGGAGAGG TCACACACGA AACCTTGGAC GCCTGCAAAC GCGGCAACGG AATGATCATC
TCGTGGCTGC GTGGCAAGGG CGAGATTTTC ACCGCCGCGA CCTGTGAATG GGTTGCGGGT
CTGATTCGGC GGGACGACCA AGTCGAACAG ATCACGCGCA ACGTCTTGAA CAGGTTTGCT
AAATCGAAGG GGCGCTCACG GTAG
 
Protein sequence
MTQDQPRPAT TPRTRAKARH ILDNYYIGPS RDDRVLEIWG YTPEMSYAPG DRVALHVSTT 
AAEWEFEIGR DGLEYVPLLT KSGLLGEHHP TPRDCSVKGC GWPEAYAITI PNDWAPGGYL
VTFRVRQDDD MVEEHHIILI RSAPDATPPT YVLVCATGTW LAYNCWGGSN HYEGITGPNG
DAFSPIVSTQ RPWTRGFCRL PKGAPRALRE QPTRPGEMVR YPFMEWAYAY GYSKKYASAG
WASYERHFAR WAEAEGYGFD VISQHDLHRD PDLLNRYACA VFVGHDEYWS ADMRDAVDAY
VDAGGHVARF AGNFLWQTRI EDEGRTQICY KYIADQDPLM GTEQEHLVSG AFEVAPVDRP
GALTFGVNAL RGVYAGLGNC VGGGAGGFTV YRDDHWAFQG AGLGYGDVLG ARSRIFGYEV
DGLDYRFEDG LPFPTCLDGA VPEIEILAMG LATNIEADQG VWGETLYIGS ADAAFKAQVL
FGEVTHETLD ACKRGNGMII SWLRGKGEIF TAATCEWVAG LIRRDDQVEQ ITRNVLNRFA
KSKGRSR