| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_3632 |
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| Symbol | |
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| ID | 5714162 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009955 |
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| Strand | + |
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| Start bp | 33247 |
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| End bp | 35727 |
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| Gene Length | 2481 bp |
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| Protein Length | 826 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641276550 |
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| Product | L-carnitine dehydratase/bile acid-inducible protein F |
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| Protein accession | YP_001541846 |
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| Protein GI | 159046174 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1804] Predicted acyl-CoA transferases/carnitine dehydratase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.934008 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGAACC GTCCACTTTC CCACGTTCGT GTCCTTGATT TTGGGCACTA TCTGGCCGGG
CCATTGGTCG GTATGATGCT GGCCGATCTT GGCGCCGACG TTATCCGCAT CGATCCGCCA
GCTGGCCCAA GGTGGAAGGA CCCGGCTTTC GACATGCTGT CGCGTGGCAA GCGTGCACTG
ACGCTTGATC TCAAGACTGC AAGCGGGCGC GATACAGCAC TTGATCTGGT GCGCCGCGCT
GATGTGGTGA TCGAGAACTT CCGCCCCGGC GTGATGGAGC GGCTGGGGCT TGGGCAGGAC
GCGCTTAGAC AGGCGAACGC TGATATTGTT TCGCTGTCGC TTCCAGGCTT CGCGTCAACC
GATCCCGAGC TCGGCAGATT GGCAGCCTGG GAGGCGGTGG TCGCGGCACG CACCGGGCAG
TATACCGACA TGGGGTTGAA CCGTCGGCTG ATGGGGATCA ACCCCTCCTT TACGCCGCTG
GGACTGGCTT CAGCTTATGG TGCCGCATTC GGCGCGATGT CGGTCCTCTT TGCACTGGGA
GCGCGAAGCC GGATGGGAGG TGACCACATC GAGGTGCCGC TTGCGTCTGC CCTGCTGGAG
GGGCTGGTTT ACAATTGCGA GCAGATCGAG GACTACCCCG ACCGCTACAA ATCCCCACGC
GAGCTGGAGC TGGAGCGGCG CGCACGTGAC GGTCTGCCCA ACAACCTGAG CTTTGCCGAG
CTGTCCGAAT TTCTTGATCC GTTCTACCGG ACCTATACCT GTGCAGACGG GCGCGGGTTT
TATATCGTGT CCTGCTCGAT CGTGAACCAC CCCCAAAGGG TGCTTGAAGT TCTCGGGCTT
GGCGATCTGT TGAAGGACCT GCCGGATTTC GATGTCTATG TCGATCAGGC AGATTGGCCC
GGGGAATGGG CTTTGCGGAG CTATCCGGTG GGGGCAGGCG ATCGCAAGCG CCTGTCGGAT
GCGATGAAGG CCGCATTCCT GACCCGTCCT TCGCATGAGT GGGAAAAACT GTTCGGTGCG
GCCAAGGCCC CGGCCACAGC GCAACGCAGC ACAGCCGAAT GGCTGGCCGA CCCCCATGCG
TTGGCCTCGG GGCTGGTGAT CGCTCTTGAC GATCCCCGCC ATGGGCAGAT GCGGCAGATG
GGCAATGTCG CTTGGCTGGC GGATGATCCG GGTGCGATGG AAAAAACCGC CGGGCCAGAG
CCAGATAGCT TTCGCGAGAA ACTGACCGCC GTTCTTGCAG AGTCGCCGCG AATGCCCATG
GGCGGCGGCG GTAAGGGCCT CTGGCTTGAC GGTTTGAAGG TGCTGGACCT AACCAATGTC
ATTGCCGGAC CGACCGTCGG TTCGACACTG GCGCGCTTCG GGGCGCAGGT CACGCTCGTC
CAGCCTGTAA GGCCATCGGT CGACCCATGG AATGCGGTGG TCTTCGGACT GCATGCGCAG
CGCGGCAAGG AAAGCGTGCT GCTCGATCTG CGCTCGGACC AGGGGCAAGA GGTTCTTTGG
CGAATGGTGG CCGAGGCGGA TGTGATCACC ATGAACGGCA CTGACCAAAA ACTTGACGCA
CTGGGCCTGA ACGAAGCGCG ACTGAAGGAC ATCAATCCGC GTCTCATTCT GGTGCAGCTT
GATGCCTGGG GCGGACCGCG CCCGGGGCCG AAATCGGATC ACCTCGGCTA TGACGACCTC
GCGCAGGCGG CGACCGGTGT GATGACCCGC TTTGGCGGTG GGCCGGAGAC ACCCGAGGAA
CACGCGCATT TCGGCACCAT CGACGCACTG ACAGGGTATT GCGCCTGTGT CGCCCTCGGC
GCGGCGCTGG AGCGGCTCAG GAAGACTGGC AAGGGCGGTA TTGCCCGCGC GTCTTTGGCC
GCCGCAGGCG AGATGATACA GGCGCAGTTC ATGTATGACT TCGACGGACG AGCGCCCTTT
GACGAACCCT CCGGGCGCGC GGTGCGTGGC TGGGGGCCAT TCTATCGGTG CTATGAGGCC
GCTGATGGCT GGATGTTCTT TGCGGCACCG ACAGAGCGGG AGGCGGCGCT GACCCGGGTG
GCGGATGTAT CCGACCTCGC GGGACTGAAG GGCACTGATC TGGAGGTCGC ACTTGCAGAC
CGGTTTACGC AAAGGCCGGT TGCAGACTGG ATGCGTGCCT TCGCAAGCGG CTCGGTGGGG
ATCACGCCAC TTGGCTCCCT CCACGGCACG CGCGATGCGG CCCTGCAGCG GGAAAGCGAA
GGCCAGATCG ATATATCCAA GGCGACCTTT CGCGCGATAC GCCATGATCA ACACCCGATG
GGGCGGTGGG TCGACCTTAT CGCGCCGAAT GCAGTACGGC CCGAGAAAGC CGGCATAACC
ATTCCCGGGC CCGCACCGAA ATATGGCCAA GATACGCGCG AAGTCCTTGC ACGCCTTGGC
TATGAAGATG CGGAAGTCCA AAGCATGATC GACGGTGGGG CCGCTGCGGA CAGCTGGTCG
GAGAAATACC TGCCGGAATA A
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| Protein sequence | MQNRPLSHVR VLDFGHYLAG PLVGMMLADL GADVIRIDPP AGPRWKDPAF DMLSRGKRAL
TLDLKTASGR DTALDLVRRA DVVIENFRPG VMERLGLGQD ALRQANADIV SLSLPGFAST
DPELGRLAAW EAVVAARTGQ YTDMGLNRRL MGINPSFTPL GLASAYGAAF GAMSVLFALG
ARSRMGGDHI EVPLASALLE GLVYNCEQIE DYPDRYKSPR ELELERRARD GLPNNLSFAE
LSEFLDPFYR TYTCADGRGF YIVSCSIVNH PQRVLEVLGL GDLLKDLPDF DVYVDQADWP
GEWALRSYPV GAGDRKRLSD AMKAAFLTRP SHEWEKLFGA AKAPATAQRS TAEWLADPHA
LASGLVIALD DPRHGQMRQM GNVAWLADDP GAMEKTAGPE PDSFREKLTA VLAESPRMPM
GGGGKGLWLD GLKVLDLTNV IAGPTVGSTL ARFGAQVTLV QPVRPSVDPW NAVVFGLHAQ
RGKESVLLDL RSDQGQEVLW RMVAEADVIT MNGTDQKLDA LGLNEARLKD INPRLILVQL
DAWGGPRPGP KSDHLGYDDL AQAATGVMTR FGGGPETPEE HAHFGTIDAL TGYCACVALG
AALERLRKTG KGGIARASLA AAGEMIQAQF MYDFDGRAPF DEPSGRAVRG WGPFYRCYEA
ADGWMFFAAP TEREAALTRV ADVSDLAGLK GTDLEVALAD RFTQRPVADW MRAFASGSVG
ITPLGSLHGT RDAALQRESE GQIDISKATF RAIRHDQHPM GRWVDLIAPN AVRPEKAGIT
IPGPAPKYGQ DTREVLARLG YEDAEVQSMI DGGAAADSWS EKYLPE
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