| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_3631 |
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| Symbol | |
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| ID | 5714161 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009955 |
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| Strand | - |
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| Start bp | 32223 |
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| End bp | 33164 |
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| Gene Length | 942 bp |
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| Protein Length | 313 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 641276549 |
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| Product | AraC family transcriptional regulator |
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| Protein accession | YP_001541845 |
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| Protein GI | 159046173 |
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| COG category | [K] Transcription |
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| COG ID | [COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.796927 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGATCAA TTCTGCCAAT GCGTTCCATC CACATCTCTG TTTTGCTGTG CGATGCCTTT
TCCAACATGG TGCTTGCCTG CCTGCTTGAA CCGTTGCGGG TGGTGCGTGA CCAAACCGGT
GCAGATGTCC GCTGGAACAT TCTGACGGAT GGCGATCGTG CCGTGAGCAG TTCCAGCGGT
CTGAGCGTTT CACCGGAAAT GCCGATAACG GACGCGCTTG AGCCCGATCT GGTCATCATC
ATTGGTGGCG ACGCCTTTCG AAACACCAAG GGCGTGACCT CCGCTCGCAG TCTTGGGCGA
CTGATGCAGG GTGCCACGGT GATTGCAGCT GATACCGGTG CCTGGATTCT GGCGCGGGGT
GGGTTCCTGA ACGCTCGGAA AGCCACGTTG CACTGGCAGC TACTTGAGGA ATTTGCCGAG
GAGTTTCCTA AGGTTGAGGT TCTCCCTGAT CGCCATGTGC AGGATGGCCG GTTCTGGACA
TGCGGCAGCG CGGCAGCGGC TTTAGATCTG ATGCTGCTGT TCATTCGGGA GCGGTTCGGT
GCCTCCGTCG CATTTGACGC TGGTGCAATG TTCCTGCACG ACAACGCCAG ACGGCACGGC
GCCTCCTATC CCGATCAGGC ATTATCGCAA GCCGTGTCCC CAAAGCTCAA ACGCGTCGTC
GTGCTCATGT CGGAAGCACT CGAGACAACG CAACCTGTCC CTTCACTGGC GGAGCAGGCA
AATATATCCG AACGGTCCTT GCGCCGTCTG TTCTGGACGG AATTGCAGAC CACGCCGGGG
CGCTACTACT TGCTTCTTCG TCTAGCCCGC GCCCGCGAGC TGCTTCGATA CAGCGACATA
TCACTCGATC AAATCGCCTT GCGTTGCGGG TTTGCCAATG CGACCACCCT GACACGTAGT
CTGCGCAAAA ATTTCTCATC CGATCCGCTT CGGGATCGTT AG
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| Protein sequence | MRSILPMRSI HISVLLCDAF SNMVLACLLE PLRVVRDQTG ADVRWNILTD GDRAVSSSSG
LSVSPEMPIT DALEPDLVII IGGDAFRNTK GVTSARSLGR LMQGATVIAA DTGAWILARG
GFLNARKATL HWQLLEEFAE EFPKVEVLPD RHVQDGRFWT CGSAAAALDL MLLFIRERFG
ASVAFDAGAM FLHDNARRHG ASYPDQALSQ AVSPKLKRVV VLMSEALETT QPVPSLAEQA
NISERSLRRL FWTELQTTPG RYYLLLRLAR ARELLRYSDI SLDQIALRCG FANATTLTRS
LRKNFSSDPL RDR
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