Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dshi_3630 |
Symbol | |
ID | 5714160 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dinoroseobacter shibae DFL 12 |
Kingdom | Bacteria |
Replicon accession | NC_009955 |
Strand | + |
Start bp | 30576 |
End bp | 31778 |
Gene Length | 1203 bp |
Protein Length | 400 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 641276548 |
Product | putative transposase |
Protein accession | YP_001541844 |
Protein GI | 159046172 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.954722 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCTCGTC CCAGACTGGA GGTCGCGGAT ATCTTCCGCG ATCATGGGCC GGCCTATCGC CGCGAACATG CCGGACACCT GAACCTTCCA CAGTTGAAGG TCATGTCCGC GATTGAGAAC TGCCGCACCG CCGCTCTCGG CGGGCATGTC GCTGCCTGCA CAGAGTGCGA TCACCAGCAC ATTGCATACA ACTCCTGCCG CAATCGGCAC TGCCCGAAGT GTCAGGGAGC AACCGCAAAA GACTGGATGC AGGCGCGCAT CGAAGACCTT CTGCCGGTTG AATACTTCCA TGTGGTGTTC ACGCTGCCGG CCCAGATTGC GGACATTGCC TTCCAGAACA AGGCGGAGGT CTATGGTCTG TTGTTCAAGG CATCCGCGCA GACTCTGCTG ACCATTGCGG CCGATCCAAA ACACCTTGGT GCGCGGATCG GTATGACCTC GGTCTTGCAT ACCTGGGGCT CGGCGATGAC GCACCACCCG CATGTGCATG TCATTGTGCC GGGTGGCGGG CTGTCGCCGG ACGGGTCCCG CTGGGTCGCC TGTCGCCCGG GGTTCTTCCT GCCGGTGAAG GTCCTGTCGC AGCTGTTCCG GCGTTTGTTC CTCGAAGGGC TGATCAGACT GCACCAAACG GGCAAGCTGG CCTTCTTCGG GGAACTGGCC GGACTGGCCG ATCCCGATGC CTTCGCCTCC CATCTCGCGC CGCTGCGCAA AGCCAGCTGG GTTGTTTATG CCAAGCCACC CTTCGGCGGG CCAGAGGCGG TGCTGGCCTA TCTGAGCCGA TACACCCACC GGGTCGCGAT CTCGAACCAC CGCCTCGTCA GCGCGGATGC CGAGACCGTC GCGTTCCGAT GGAAAGACTA CCGCATCAAG CGCGGCGACC GGATGAAGGT CATGCGCCTG CCCACGGGCG AGTTCATCCG GCGGTTCCTG ATCCATGTCC TGCCATCTGG CTTCCATCGC ATCCGCCACA CAGGGTTCCT GGCCAATGGA ATCCGTCGTG ACCGGATCGC GGAGATCAGG CGTTTGCTCA ATACAGAACC AAAACCCGGC CAAACGCCAG TCGAGGGGGA AAGTGACAAC CCCGCAGGTC TTGATGCCCA TCAGCCTTGC CCAAAGTGCG ACGGCGCCAT GATCGTCATC GAGACCTTCA CACGGGGCCA AACACCCAGA TCCCGCGCAC CGCCACGGGA GAACGCCGCA TGA
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Protein sequence | MPRPRLEVAD IFRDHGPAYR REHAGHLNLP QLKVMSAIEN CRTAALGGHV AACTECDHQH IAYNSCRNRH CPKCQGATAK DWMQARIEDL LPVEYFHVVF TLPAQIADIA FQNKAEVYGL LFKASAQTLL TIAADPKHLG ARIGMTSVLH TWGSAMTHHP HVHVIVPGGG LSPDGSRWVA CRPGFFLPVK VLSQLFRRLF LEGLIRLHQT GKLAFFGELA GLADPDAFAS HLAPLRKASW VVYAKPPFGG PEAVLAYLSR YTHRVAISNH RLVSADAETV AFRWKDYRIK RGDRMKVMRL PTGEFIRRFL IHVLPSGFHR IRHTGFLANG IRRDRIAEIR RLLNTEPKPG QTPVEGESDN PAGLDAHQPC PKCDGAMIVI ETFTRGQTPR SRAPPRENAA
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