Gene Dshi_3628 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_3628 
Symbol 
ID5714158 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009955 
Strand
Start bp28756 
End bp29451 
Gene Length696 bp 
Protein Length231 aa 
Translation table11 
GC content58% 
IMG OID641276546 
Producthypothetical protein 
Protein accessionYP_001541842 
Protein GI159046170 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.508486 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGACATT TACCTAAGAA ACTCCTTCCC TCGCTCGCTG TCGCTTTGAC TGCGACAAGT 
TTTTTGCTGC CGACACCTGC GCGCGCGCAG ACATACCCAA TCGATTGCGC GATCCTCTTA
TGCTTGTCTG GTGGCTGGCC TGCTTCCGTG CCTTGCGCAC GAGCTCGCGC CGAATTCATC
CGGCGGATTA CGCCCTGGCC GGTGGAACCG CCGCTGCAGA TCTGGCGCTG TCCCATGGGC
GCTTCCTATG AGAGCGATCG GCCATTCAGC AGCGCTGGCC GCATCTTTGA AGCATTTTAC
CAGACGGACA GCCGTCGACC GCTCCAATCC TTGCAAGTCC ATGATCTCGT TCCCACCGAC
CAGGCACTCC GGCTTGTTCA GGATCGCGCG GACATCGATA TCAGCGGACC TGAGTTCAAC
TTTGTGCGGT CCATCCGCGT CTTTGATGTT CGCTATGCCC GTCAGCACGA ATCCGGTCGT
GACGGTGACT GCAATCGCAG CGCGACCGTG GTCCTCGGCA CTTACGGGAC CCAAGGCGAT
TTCTCTTGGC AGAGGTCTTC GGTCACTGCC CTTCCTTCGG CTCACGTAGG TCTTGAACGC
TGGGGCGAGC ATTGCCCCGG CATTTATCAC CGATCCGTAT TCGTCGAGTG GCGTGACTAT
GAGGGCAACT ATGGCTTCGA ACAGGTGAAC TACTAG
 
Protein sequence
MRHLPKKLLP SLAVALTATS FLLPTPARAQ TYPIDCAILL CLSGGWPASV PCARARAEFI 
RRITPWPVEP PLQIWRCPMG ASYESDRPFS SAGRIFEAFY QTDSRRPLQS LQVHDLVPTD
QALRLVQDRA DIDISGPEFN FVRSIRVFDV RYARQHESGR DGDCNRSATV VLGTYGTQGD
FSWQRSSVTA LPSAHVGLER WGEHCPGIYH RSVFVEWRDY EGNYGFEQVN Y