| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_3621 |
|---|
| Symbol | |
|---|
| ID | 5714151 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dinoroseobacter shibae DFL 12 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009955 |
|---|
| Strand | - |
|---|
| Start bp | 24192 |
|---|
| End bp | 24614 |
|---|
| Gene Length | 423 bp |
|---|
| Protein Length | 140 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 641276539 |
|---|
| Product | disulphide bond formation protein DsbB |
|---|
| Protein accession | YP_001541835 |
|---|
| Protein GI | 159046163 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG1495] Disulfide bond formation protein DsbB |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.566272 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCCGAC TTTCCGGAGA GACGGCCCTT GGCCTGGCCT GGATCATCGC GCTCACCGCG
TCGCTTGCCG TGCTCTTCAT CGGCGAGGTT CTGGGGCAGA CACCTTGCGT GCTCTGCTGG
TTCCAGCGTG CCTTCATGTT CCCCTTGGCC ATCATCCTCG GGCTTGGGCT GTGGTGGCAG
GATCGGCGCG TGGGTCGCTA CGGGATCGCG CTGGCTTTGG GCGGTGCCGC CGTCGCGCTT
TGGCACTTGG GCCTCTATGT CGGCGTTATC CCCGAGCGTA TCCAGCCCTG CACGGCGACC
GGCCCATCCT GTACCGACGA CAATCAACTG GTCTTCGGCA TTCCGATTCC TTTGATGGCG
CTCGTCGCCT TCGCGATGAT CGGTCTGCTG TCGGCTCTCT CACTGAAGGA AACACAAAAA
TGA
|
|---|
| Protein sequence | MTRLSGETAL GLAWIIALTA SLAVLFIGEV LGQTPCVLCW FQRAFMFPLA IILGLGLWWQ
DRRVGRYGIA LALGGAAVAL WHLGLYVGVI PERIQPCTAT GPSCTDDNQL VFGIPIPLMA
LVAFAMIGLL SALSLKETQK
|
|---|
| |