Gene Dshi_3620 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_3620 
Symbol 
ID5714150 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009955 
Strand
Start bp23536 
End bp24195 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content64% 
IMG OID641276538 
ProductDSBA oxidoreductase 
Protein accessionYP_001541834 
Protein GI159046162 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1651] Protein-disulfide isomerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.512304 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACGAC GCGGCCTCAT CCTGTCCGTT CTCGCGCTCG GGGTCGCCGG TTTCGGCGGT 
GCCGCCTGGT ATGCCACCCG CCCCGACCCG ATTGCCGCGT CCGATCCCAT CGACCCTGAA
ATGGCCGACG CGCTGATCCG ACCCTATTCC CCGATCCTCG GGCCCGAGGA TGCGCCCGTA
ACCATCGTTG AATTCTTCGA CCCGGCCTGC GAGGCATGCC GCGCTTTCTA TCCGGTCGTC
GAGGATATCA TGGCGGAGCA CGGAGACGCG GTGCGCGTTG TAATCCGCTA TACGCCTTTT
CACGGCGAGG CGTCGGTAGA AGCGATCCGT GTGCTCGAGG CGGCGCGCAT GCAGGACGTG
TTTGAACCTG TGCTCGAGGC AGTCTTGCGA GAGCAGCCCA GATGGGCGTC TCACGGGACC
CCGGCACCCG GATTGATCCT TGAGATTGCA GCAAGCGGAG GTCTGGATGT CGAAGCTGCC
CGGACACAGA TGCTGGCCCC CGGTGTTGTG GCGGTGCTCA ACCAGGACCG CGCCGATGTC
GAGACAGTCG GGGTCCGCCA AACGCCCACG TTCTTCGTGA ACGGCAAGCC TCTCGATCCG
TTCGGTGAGG CCGAATTGCA GAGGCTGGTG GCAGTGGAAG TTGCGGCAAG CCAAAGCTGA
 
Protein sequence
MKRRGLILSV LALGVAGFGG AAWYATRPDP IAASDPIDPE MADALIRPYS PILGPEDAPV 
TIVEFFDPAC EACRAFYPVV EDIMAEHGDA VRVVIRYTPF HGEASVEAIR VLEAARMQDV
FEPVLEAVLR EQPRWASHGT PAPGLILEIA ASGGLDVEAA RTQMLAPGVV AVLNQDRADV
ETVGVRQTPT FFVNGKPLDP FGEAELQRLV AVEVAASQS