Gene Dshi_3619 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_3619 
Symbol 
ID5714149 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009955 
Strand
Start bp23043 
End bp23513 
Gene Length471 bp 
Protein Length156 aa 
Translation table11 
GC content62% 
IMG OID641276537 
Producthypothetical protein 
Protein accessionYP_001541833 
Protein GI159046161 
COG category[S] Function unknown 
COG ID[COG2847] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.205092 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGTGAAGA AGTTGAGATA TACCAATGCA TTGGCCGTGC TTTTGACGGT TGCAGGGCTG 
TCGGCCCCCG CACTGGCCGG TTCGGAGGAT GTCGTGGTCG AGAATGCGTG GTCCCGCGCC
TCGATCGGCG TCAACAGGCC AGGTGCCGCC TATATGACCG TGCGCAACAC GGGTGAAGAC
GCCGTTACGC TGACCGGACT TGCGACACCG CTGGCAATGA TGCCCGAGAT CCATGAGTCG
AAAACCAACT CCGATGGCGT CAGTTCCATG GCGCCTGCAG GCGAGATCAC GATTGAGCCC
GGCCAAAGCG TGGCATTGGA GCCGGGCGGG TTGCACGCCA TGCTCATGAA GCTGCAAGAG
CCGATGACCG AAGGCGAGAA TTTCCCGCTG ACACTGACCT TCTCGGATGG CGGCAAGGTG
ACGGTCGAGG TCCCAATCCT CGGAATCGCC GCGCGTGGAC CGGAGGGCTG A
 
Protein sequence
MVKKLRYTNA LAVLLTVAGL SAPALAGSED VVVENAWSRA SIGVNRPGAA YMTVRNTGED 
AVTLTGLATP LAMMPEIHES KTNSDGVSSM APAGEITIEP GQSVALEPGG LHAMLMKLQE
PMTEGENFPL TLTFSDGGKV TVEVPILGIA ARGPEG