Gene Dshi_3615 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_3615 
Symbol 
ID5714145 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009955 
Strand
Start bp19780 
End bp20562 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content63% 
IMG OID641276533 
Productzinc/iron permease 
Protein accessionYP_001541829 
Protein GI159046157 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0428] Predicted divalent heavy-metal cations transporter 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.314729 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGAACCCC TCTCCCCCAT AGCGCTTGGC TTTCTTGGAA GCCTGGCCGC CGGATCGCTG 
ACCGCGGTCG GGGCGGTCCC CGTTCTTTTT GGGCGCATCC CGTCCCGGGC CACGCGCGAT
CTGCTGCTTG GCTTCGCGGC GGGTGTCATG CTCGCGGCTT CGTTCTTCTC GCTGATCATC
CCGGCTCTCG ACGCAGCTGA AGGACAGTTC GACAACGGTG CTCTCCCGGC GGCCATCGTA
TGTGTTGCGA TCCTGCTTGG CATGGGCGCG ATCGCTCTGA TGAACGAACG GCTACCGCAT
GAACATTTCA AGACGGGGCG GGAAGGTCCC GACGCCGCAT CGCTGCGGCG CGTCTGGCTT
TTCATCATCG CGATCACTAT CCACAATTTT CCCGAAGGGC TTGCCGTCGG CGTCGGGTTC
GGGGCTGACG GTTTGTCGGG CGGGTTGCCA CTTGCGATCG GTATTGGATT ACAGAATGCC
CCCGAAGGTC TGGCGGTGGC GGTTTCGTTG CTCGGCGAGG GCTATTCCAG GCTTCGCGCC
TGGGGCATCG CCGCTCTGAC CGGTCTCGTC GAGCCCGTCG GTGGACTTCT CGGCGCAGGG
ATTATCAGTC TTTCGCAACC GCTGCTGCCC TGGGGTCTCG CCTTCGCAGC AGGTGCGATG
CTCTACGTCA TCAGCCACGA GATCATTCCG GAAACCCACC GATCCGGCCA TCAGAACAGG
GCGACGCTCG GCCTCGCCGT TGGTCTTGTG ATCATGTTGT TCCTCGACGT CTGGCTGGGA
TAA
 
Protein sequence
MEPLSPIALG FLGSLAAGSL TAVGAVPVLF GRIPSRATRD LLLGFAAGVM LAASFFSLII 
PALDAAEGQF DNGALPAAIV CVAILLGMGA IALMNERLPH EHFKTGREGP DAASLRRVWL
FIIAITIHNF PEGLAVGVGF GADGLSGGLP LAIGIGLQNA PEGLAVAVSL LGEGYSRLRA
WGIAALTGLV EPVGGLLGAG IISLSQPLLP WGLAFAAGAM LYVISHEIIP ETHRSGHQNR
ATLGLAVGLV IMLFLDVWLG